Variant report

Variant	rs73873649
Chromosome Location	chr3:157076363-157076364
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs58287058	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58892422	1.00[AMR][1000 genomes]
rs59252849	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59359862	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61290537	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873603	1.00[AMR][1000 genomes]
rs73873610	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873612	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873613	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873617	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873622	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873624	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873627	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873633	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873646	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873651	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873652	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873653	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873658	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873660	1.00[AMR][1000 genomes]
rs73873665	1.00[AMR][1000 genomes]
rs73873668	1.00[AMR][1000 genomes]
rs73873671	1.00[AMR][1000 genomes]
rs73873674	1.00[AMR][1000 genomes]
rs73873677	1.00[AMR][1000 genomes]
rs73873679	1.00[AMR][1000 genomes]
rs73873799	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873801	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873802	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73878004	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157066000-157076400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr3:157066000-157086800	Weak transcription	Pancreas	Pancrea
3	chr3:157066600-157083200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr3:157070400-157077400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr3:157072400-157077200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr3:157073000-157077800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:157073400-157076800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr3:157073400-157076800	Weak transcription	HSMM	muscle
9	chr3:157073400-157079800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr3:157074400-157077400	Enhancers	Muscle Satellite Cultured Cells	--
11	chr3:157074600-157076400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr3:157074600-157076600	Weak transcription	NHLF	lung
13	chr3:157074600-157077200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr3:157074600-157077400	Enhancers	HUVEC	blood vessel
15	chr3:157074800-157076600	Weak transcription	NHDF-Ad	bronchial
16	chr3:157075200-157076800	Weak transcription	A549	lung
17	chr3:157075400-157076400	Weak transcription	Osteobl	bone
18	chr3:157075800-157078600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr3:157075800-157078800	Enhancers	NHEK	skin
20	chr3:157076000-157077200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr3:157076000-157078800	Enhancers	NH-A	brain
22	chr3:157076200-157076600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr3:157076200-157076600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr3:157076200-157077800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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