The 2.0 version of rSNPBase

Variant report

Variant rs585527
Chromosome Location chr11:86201975-86201976
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86160200-86221000 Weak transcription Primary T cells from cord blood blood
2 chr11:86172200-86208200 Weak transcription Pancreas Pancrea
3 chr11:86172400-86208400 Weak transcription Brain Angular Gyrus brain
4 chr11:86172400-86227000 Weak transcription Brain Cingulate Gyrus brain
5 chr11:86181800-86208800 Weak transcription Gastric stomach
6 chr11:86187600-86218600 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr11:86187800-86203200 Weak transcription Fetal Heart heart
8 chr11:86188000-86210400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr11:86189200-86222600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr11:86189400-86206400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr11:86189600-86221600 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr11:86192200-86208400 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr11:86193400-86208600 Weak transcription Brain Anterior Caudate brain
14 chr11:86195000-86203200 Enhancers Fetal Brain Male brain
15 chr11:86195200-86208400 Weak transcription Right Ventricle heart
16 chr11:86195200-86222200 Weak transcription Rectal Smooth Muscle rectum
17 chr11:86195600-86202800 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr11:86195600-86203600 Weak transcription Aorta Aorta
19 chr11:86195800-86206400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr11:86196000-86203000 Weak transcription Left Ventricle heart
21 chr11:86196000-86208800 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr11:86196200-86208200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr11:86196200-86213600 Weak transcription Brain Germinal Matrix brain
24 chr11:86196400-86208400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr11:86196600-86203600 Weak transcription Ovary ovary
26 chr11:86196600-86208200 Weak transcription Osteobl bone
27 chr11:86196800-86208000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr11:86197000-86208000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr11:86197600-86208800 Weak transcription Brain Inferior Temporal Lobe brain
30 chr11:86198000-86202200 Weak transcription Fetal Muscle Trunk muscle
31 chr11:86198000-86202200 Weak transcription Right Atrium heart
32 chr11:86198000-86203800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr11:86198000-86211000 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr11:86198200-86208200 Weak transcription Fetal Stomach stomach
35 chr11:86198200-86210600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr11:86198400-86206600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr11:86198600-86202200 Weak transcription NHDF-Ad bronchial
38 chr11:86198600-86208400 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr11:86198600-86222800 Weak transcription Esophagus oesophagus
40 chr11:86198800-86203400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr11:86198800-86204200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr11:86198800-86205400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr11:86199000-86204000 Weak transcription Primary hematopoietic stem cells blood
44 chr11:86199000-86208400 Weak transcription A549 lung
45 chr11:86199800-86203400 Weak transcription Stomach Smooth Muscle stomach
46 chr11:86199800-86208200 Weak transcription Lung lung
47 chr11:86200000-86206600 Weak transcription Adipose Nuclei Adipose
48 chr11:86200800-86204000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr11:86201000-86202800 Enhancers Fetal Lung lung
50 chr11:86201000-86206400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015