Variant report
| Variant | rs58814864 |
|---|---|
| Chromosome Location | chr11:93706619-93706620 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr11:93700458..93703504-chr11:93704523..93708049,5 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:33)
| rs_ID | r2[population] |
|---|---|
| rs11822030 | 1.00[EUR][1000 genomes] |
| rs11825559 | 1.00[EUR][1000 genomes] |
| rs11826118 | 1.00[EUR][1000 genomes] |
| rs11826223 | 1.00[EUR][1000 genomes] |
| rs12276417 | 1.00[EUR][1000 genomes] |
| rs1518556 | 1.00[EUR][1000 genomes] |
| rs1518557 | 1.00[EUR][1000 genomes] |
| rs1518558 | 1.00[EUR][1000 genomes] |
| rs1518559 | 1.00[EUR][1000 genomes] |
| rs16919776 | 1.00[EUR][1000 genomes] |
| rs16919850 | 1.00[EUR][1000 genomes] |
| rs16919852 | 1.00[EUR][1000 genomes] |
| rs16919866 | 1.00[EUR][1000 genomes] |
| rs16919972 | 1.00[EUR][1000 genomes] |
| rs2460043 | 1.00[EUR][1000 genomes] |
| rs2511377 | 1.00[EUR][1000 genomes] |
| rs60464761 | 1.00[EUR][1000 genomes] |
| rs60818592 | 1.00[EUR][1000 genomes] |
| rs7102046 | 1.00[EUR][1000 genomes] |
| rs7120920 | 1.00[EUR][1000 genomes] |
| rs73512239 | 1.00[EUR][1000 genomes] |
| rs73512242 | 1.00[EUR][1000 genomes] |
| rs73512245 | 1.00[EUR][1000 genomes] |
| rs73512246 | 1.00[EUR][1000 genomes] |
| rs73512252 | 1.00[EUR][1000 genomes] |
| rs73512253 | 1.00[EUR][1000 genomes] |
| rs73512254 | 1.00[EUR][1000 genomes] |
| rs73512255 | 1.00[EUR][1000 genomes] |
| rs73512256 | 1.00[EUR][1000 genomes] |
| rs73512257 | 1.00[EUR][1000 genomes] |
| rs73512258 | 1.00[EUR][1000 genomes] |
| rs73512260 | 1.00[EUR][1000 genomes] |
| rs983327 | 1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv508650 | chr11:93609010-93713576 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS | Chromatin interactive region | 4 gene(s) | inside rSNPs | diseases |
| 2 | nsv1049467 | chr11:93651025-93778717 | ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
| 3 | nsv442 | chr11:93665117-93717973 | Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh | Chromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
| 4 | esv2757466 | chr11:93676224-93714950 | Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
| 5 | esv2759854 | chr11:93676224-93714950 | Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:93705800-93707200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 2 | chr11:93706200-93706800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 3 | chr11:93706400-93706800 | Enhancers | Fetal Intestine Large | intestine |
| 4 | chr11:93706400-93706800 | Flanking Active TSS | K562 | blood |
