The 2.0 version of rSNPBase

Variant report

Variant rs589626
Chromosome Location chr11:34996676-34996677
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34939200-35000000 Weak transcription Thymus Thymus
2 chr11:34948000-35000400 Weak transcription Stomach Smooth Muscle stomach
3 chr11:34948000-35006800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr11:34948200-34997000 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr11:34951800-35000200 Weak transcription Psoas Muscle Psoas
6 chr11:34952200-35010800 Weak transcription Small Intestine intestine
7 chr11:34959000-35019600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr11:34961800-34997200 Weak transcription HSMMtube muscle
9 chr11:34962000-35008200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr11:34962600-34998000 Weak transcription Rectal Smooth Muscle rectum
11 chr11:34962800-35006600 Weak transcription Esophagus oesophagus
12 chr11:34965400-35008200 Weak transcription Gastric stomach
13 chr11:34969400-34999200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr11:34970000-35000400 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr11:34973800-34997000 Weak transcription HMEC breast
16 chr11:34975400-35006800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr11:34976600-35018400 Weak transcription Spleen Spleen
18 chr11:34977800-35009800 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr11:34981600-35000000 Weak transcription Brain Cingulate Gyrus brain
20 chr11:34981600-35000200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr11:34981600-35006000 Weak transcription Brain Anterior Caudate brain
22 chr11:34982200-35014200 Weak transcription Fetal Brain Male brain
23 chr11:34983000-34997000 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr11:34983400-35006800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr11:34983400-35008200 Weak transcription Aorta Aorta
26 chr11:34983600-35018200 Weak transcription H9 Cell Line embryonic stem cell
27 chr11:34983800-35000000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr11:34984800-35001000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr11:34985200-35000200 Weak transcription Lung lung
30 chr11:34985200-35026600 Weak transcription Colonic Mucosa Colon
31 chr11:34985400-34998200 Weak transcription Placenta Amnion Placenta Amnion
32 chr11:34985600-34998600 Weak transcription Stomach Mucosa stomach
33 chr11:34986400-34997200 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr11:34986800-34996800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr11:34987000-35008200 Weak transcription Pancreas Pancrea
36 chr11:34987000-35017000 Weak transcription K562 blood
37 chr11:34987200-34998000 Weak transcription Colon Smooth Muscle Colon
38 chr11:34987200-35000000 Weak transcription Fetal Muscle Leg muscle
39 chr11:34988000-34998000 Strong transcription Primary B cells from cord blood blood
40 chr11:34988400-35000200 Weak transcription Ovary ovary
41 chr11:34988800-35001000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr11:34988800-35006200 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr11:34989200-34997200 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr11:34989800-35000000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr11:34989800-35000200 Weak transcription Right Ventricle heart
46 chr11:34990200-34996800 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr11:34991000-35020800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr11:34991200-35000200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr11:34991400-35000000 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr11:34991600-35000000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015