The 2.0 version of rSNPBase

Variant report

Variant rs997664
Chromosome Location chr11:35028811-35028812
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:35000600-35035000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr11:35000800-35031000 Weak transcription Stomach Smooth Muscle stomach
3 chr11:35007000-35029800 Weak transcription Esophagus oesophagus
4 chr11:35007200-35035200 Weak transcription Fetal Stomach stomach
5 chr11:35008600-35030800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr11:35017200-35030800 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr11:35019800-35035400 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr11:35020000-35030400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr11:35020200-35029800 Weak transcription NHDF-Ad bronchial
10 chr11:35021400-35029400 Weak transcription Hela-S3 cervix
11 chr11:35025400-35029800 Weak transcription HMEC breast
12 chr11:35025400-35030800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr11:35025400-35035200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr11:35025600-35030600 Weak transcription Osteobl bone
15 chr11:35025600-35030800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr11:35025600-35030800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr11:35025800-35030400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr11:35026600-35032000 Enhancers Stomach Mucosa stomach
19 chr11:35026800-35029200 Enhancers Primary T regulatory cells fromperipheralblood blood
20 chr11:35026800-35030200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr11:35027000-35029200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr11:35027000-35029600 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr11:35027000-35029600 Weak transcription Colonic Mucosa Colon
24 chr11:35027000-35029800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr11:35027000-35029800 Weak transcription Psoas Muscle Psoas
26 chr11:35027000-35029800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr11:35027000-35030800 Weak transcription Fetal Intestine Large intestine
28 chr11:35027000-35032200 Enhancers Duodenum Mucosa Duodenum
29 chr11:35027200-35030800 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr11:35027400-35029200 Enhancers Primary T helper cells fromperipheralblood blood
31 chr11:35027400-35030200 Enhancers A549 lung
32 chr11:35027600-35029200 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr11:35027600-35029200 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr11:35027600-35030000 Enhancers Primary T helper cells PMA-I stimulated --
35 chr11:35027800-35029800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr11:35027800-35031600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr11:35028000-35029000 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr11:35028000-35029200 Enhancers Primary B cells from peripheral blood blood
39 chr11:35028000-35029600 Enhancers Monocytes-CD14+_RO01746 blood
40 chr11:35028000-35030000 Enhancers Primary monocytes fromperipheralblood blood
41 chr11:35028000-35030600 Enhancers Sigmoid Colon Sigmoid Colon
42 chr11:35028000-35031000 Enhancers Small Intestine intestine
43 chr11:35028200-35029000 Enhancers HSMMtube muscle
44 chr11:35028200-35029200 Enhancers Primary B cells from cord blood blood
45 chr11:35028200-35029600 Weak transcription Fetal Intestine Small intestine
46 chr11:35028200-35033200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr11:35028400-35029200 Enhancers Primary neutrophils fromperipheralblood blood
48 chr11:35028400-35029600 Weak transcription Gastric stomach
49 chr11:35028400-35030200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr11:35028400-35032800 Enhancers Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015