The 2.0 version of rSNPBase

Variant report

Variant rs2956090
Chromosome Location chr11:34907912-34907913
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34859000-34909400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr11:34882000-34919800 Weak transcription Left Ventricle heart
3 chr11:34891200-34919200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr11:34892600-34913000 Weak transcription Brain Anterior Caudate brain
5 chr11:34893000-34921400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr11:34894600-34909600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr11:34895000-34912000 Weak transcription Brain Angular Gyrus brain
8 chr11:34895000-34921200 Weak transcription Right Ventricle heart
9 chr11:34895400-34912000 Weak transcription Brain Cingulate Gyrus brain
10 chr11:34896000-34908200 Weak transcription Liver Liver
11 chr11:34896000-34912200 Weak transcription K562 blood
12 chr11:34896200-34909800 Weak transcription Pancreas Pancrea
13 chr11:34896600-34911600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr11:34897000-34913000 Weak transcription Lung lung
15 chr11:34897000-34919200 Weak transcription Fetal Stomach stomach
16 chr11:34897600-34919200 Weak transcription Fetal Heart heart
17 chr11:34898200-34926800 Weak transcription HSMMtube muscle
18 chr11:34898400-34908200 Weak transcription Psoas Muscle Psoas
19 chr11:34898400-34912800 Weak transcription Brain Hippocampus Middle brain
20 chr11:34898600-34908400 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr11:34899000-34917400 Weak transcription HSMM muscle
22 chr11:34900000-34911600 Weak transcription A549 lung
23 chr11:34900000-34918200 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr11:34900200-34917200 Weak transcription HUVEC blood vessel
25 chr11:34900200-34921000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr11:34900600-34909800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr11:34901000-34911200 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr11:34901200-34910600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr11:34901400-34917400 Weak transcription Fetal Kidney kidney
30 chr11:34901400-34920800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr11:34901600-34910200 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr11:34901600-34918200 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr11:34901800-34908000 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr11:34901800-34909800 Weak transcription Osteobl bone
35 chr11:34901800-34916800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr11:34901800-34917000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr11:34902000-34908000 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr11:34902000-34912000 Weak transcription NHLF lung
39 chr11:34902000-34921600 Weak transcription Muscle Satellite Cultured Cells --
40 chr11:34902200-34911000 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr11:34902200-34912000 Weak transcription NH-A brain
42 chr11:34902200-34915600 Weak transcription Colon Smooth Muscle Colon
43 chr11:34902400-34908400 Weak transcription HepG2 liver
44 chr11:34902400-34909400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr11:34902400-34912800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr11:34902800-34911800 Weak transcription Fetal Intestine Small intestine
47 chr11:34903200-34908600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr11:34903400-34909800 Weak transcription Rectal Smooth Muscle rectum
49 chr11:34903600-34919200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr11:34903800-34908000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015