Variant report

Variant	rs2025780
Chromosome Location	chr11:35006465-35006466
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 198 )
Associated
traits (count: 9 )

rSNPs within LD-proxies of this variant (count:194)

rs_ID	r²[population]
rs1011518	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1011519	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10742331	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10742332	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10768103	0.86[ASN][1000 genomes]
rs10768106	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10768108	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10768110	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10836322	0.93[ASN][1000 genomes]
rs10836323	0.92[ASN][1000 genomes]
rs10836324	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10836326	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11032916	0.90[YRI][hapmap];0.86[ASN][1000 genomes]
rs1117446	0.94[CHB][hapmap];0.85[JPT][hapmap];0.91[YRI][hapmap];0.84[ASN][1000 genomes]
rs12799433	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1326940	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs1326941	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs1326942	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs1326943	0.94[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs1326948	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1430855	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs1430856	0.86[ASN][1000 genomes]
rs1544079	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1571133	0.94[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs1571134	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs1571135	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs1648123	0.89[ASN][1000 genomes]
rs1748073	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1977420	0.94[CHB][hapmap];0.85[JPT][hapmap];0.90[YRI][hapmap];0.86[ASN][1000 genomes]
rs1977421	0.94[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs1998603	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs1998604	0.86[ASN][1000 genomes]
rs1998912	1.00[CHB][hapmap];0.85[JPT][hapmap];0.90[YRI][hapmap];0.93[ASN][1000 genomes]
rs2016821	0.88[ASN][1000 genomes]
rs2025776	0.84[YRI][hapmap];0.84[ASN][1000 genomes]
rs2025777	0.84[ASN][1000 genomes]
rs2025778	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2025779	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2031687	0.93[ASN][1000 genomes]
rs2116084	0.84[ASN][1000 genomes]
rs2217478	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs2243929	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2243948	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2253128	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2281809	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2288667	0.94[CHB][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs2288668	0.89[CHB][hapmap];0.86[JPT][hapmap]
rs2303958	0.86[ASN][1000 genomes]
rs2303959	0.84[CHB][hapmap];0.85[JPT][hapmap];0.90[YRI][hapmap];0.86[ASN][1000 genomes]
rs2469911	0.91[EUR][1000 genomes]
rs2477157	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2732531	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2732532	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2732551	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732555	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732557	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2732558	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2732559	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732560	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2732561	0.81[AMR][1000 genomes]
rs2732562	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732563	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732564	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2732565	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2761819	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2761820	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2761821	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2761822	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2762951	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2762953	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2762954	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2762956	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2762957	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2762958	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2762959	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2762960	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2762963	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2762968	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2762969	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2767033	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2767034	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767036	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767038	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767039	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767040	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767042	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767043	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767044	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767046	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767047	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2915181	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2915183	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2915190	0.94[ASN][1000 genomes]
rs2915193	1.00[CHB][hapmap];0.85[JPT][hapmap];0.90[YRI][hapmap];0.94[ASN][1000 genomes]
rs2915200	0.91[ASN][1000 genomes]
rs2915204	1.00[CHB][hapmap];0.84[JPT][hapmap];0.91[YRI][hapmap];0.89[ASN][1000 genomes]
rs2915205	1.00[CHB][hapmap];0.85[JPT][hapmap];0.90[YRI][hapmap];0.89[ASN][1000 genomes]
rs2915211	0.84[ASN][1000 genomes]
rs2915212	0.84[ASN][1000 genomes]
rs2915215	0.94[CHB][hapmap];0.81[JPT][hapmap];0.87[YRI][hapmap];0.84[ASN][1000 genomes]
rs2915216	0.94[CHB][hapmap];0.85[JPT][hapmap];0.84[ASN][1000 genomes]
rs2915219	0.86[ASN][1000 genomes]
rs2915220	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs2915221	0.94[CHB][hapmap];0.84[JPT][hapmap];0.95[YRI][hapmap];0.86[ASN][1000 genomes]
rs2915222	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs2915223	0.94[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs2915224	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs2915227	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2915234	0.86[ASN][1000 genomes]
rs2941047	0.86[ASN][1000 genomes]
rs2941048	0.86[ASN][1000 genomes]
rs2941049	0.86[ASN][1000 genomes]
rs2956081	0.93[ASN][1000 genomes]
rs2956082	0.86[ASN][1000 genomes]
rs2956083	0.86[ASN][1000 genomes]
rs2956087	1.00[CHB][hapmap];0.90[JPT][hapmap];0.91[YRI][hapmap];0.94[ASN][1000 genomes]
rs2956088	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs2956089	0.86[ASN][1000 genomes]
rs2956090	0.86[ASN][1000 genomes]
rs2956091	0.94[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs2956092	0.86[ASN][1000 genomes]
rs2956093	0.85[ASN][1000 genomes]
rs2956094	0.86[ASN][1000 genomes]
rs2956096	0.86[ASN][1000 genomes]
rs2956099	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2956105	0.89[ASN][1000 genomes]
rs2956106	1.00[CHB][hapmap];0.85[JPT][hapmap];0.90[YRI][hapmap];0.89[ASN][1000 genomes]
rs2956107	1.00[CHB][hapmap];0.85[JPT][hapmap];0.91[YRI][hapmap];0.89[ASN][1000 genomes]
rs2956108	0.89[ASN][1000 genomes]
rs2956110	0.88[ASN][1000 genomes]
rs2956111	0.88[ASN][1000 genomes]
rs2956113	0.88[ASN][1000 genomes]
rs2956114	0.94[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs2956115	0.85[ASN][1000 genomes]
rs2956117	0.88[ASN][1000 genomes]
rs2956121	0.84[ASN][1000 genomes]
rs2956123	0.93[ASN][1000 genomes]
rs2985149	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2985151	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2985381	0.94[CHB][hapmap];0.86[JPT][hapmap];0.91[YRI][hapmap];0.84[ASN][1000 genomes]
rs2985383	0.84[ASN][1000 genomes]
rs2985384	0.94[CHB][hapmap];0.90[JPT][hapmap];0.84[ASN][1000 genomes]
rs2985386	0.86[ASN][1000 genomes]
rs2985387	0.85[ASN][1000 genomes]
rs2985388	0.86[ASN][1000 genomes]
rs2985389	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs2985390	0.94[CHB][hapmap];0.85[JPT][hapmap];0.90[YRI][hapmap];0.86[ASN][1000 genomes]
rs2985391	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs2985392	0.86[ASN][1000 genomes]
rs2985393	0.86[ASN][1000 genomes]
rs2985394	0.86[ASN][1000 genomes]
rs2985395	0.86[ASN][1000 genomes]
rs2985396	0.94[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs2985397	0.86[ASN][1000 genomes]
rs2985398	0.94[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs2985399	0.94[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs2985400	0.86[ASN][1000 genomes]
rs2985401	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2985403	1.00[CHB][hapmap];0.85[JPT][hapmap];0.90[YRI][hapmap];0.93[ASN][1000 genomes]
rs2985404	0.93[ASN][1000 genomes]
rs2985405	1.00[CHB][hapmap];0.85[JPT][hapmap];0.91[YRI][hapmap];0.93[ASN][1000 genomes]
rs2986404	0.94[ASN][1000 genomes]
rs2986409	0.93[ASN][1000 genomes]
rs2986410	1.00[CHB][hapmap];0.85[JPT][hapmap];0.82[YRI][hapmap];0.93[ASN][1000 genomes]
rs2986414	0.88[ASN][1000 genomes]
rs2986416	0.87[ASN][1000 genomes]
rs2986418	0.88[ASN][1000 genomes]
rs2986419	0.86[ASN][1000 genomes]
rs2986420	0.84[ASN][1000 genomes]
rs2986422	0.86[ASN][1000 genomes]
rs2986423	0.86[ASN][1000 genomes]
rs2986424	0.94[CHB][hapmap];0.84[JPT][hapmap];0.80[YRI][hapmap];0.86[ASN][1000 genomes]
rs2986425	0.94[CHB][hapmap];0.85[JPT][hapmap];0.90[YRI][hapmap];0.86[ASN][1000 genomes]
rs2986426	0.86[ASN][1000 genomes]
rs2986427	0.94[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs2986428	0.86[ASN][1000 genomes]
rs2986429	0.89[CHB][hapmap];0.85[JPT][hapmap]
rs3118072	0.81[ASN][1000 genomes]
rs3118073	0.84[AMR][1000 genomes]
rs3932539	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs497109	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs497582	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs504034	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs523472	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs589626	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs614668	0.94[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs746124	0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs891546	0.87[ASN][1000 genomes]
rs9326	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs952489	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9667348	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs967505	0.93[ASN][1000 genomes]
rs967506	0.92[ASN][1000 genomes]
rs997664	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832119	chr11:34815528-35009370	Strong transcription Enhancers Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1045837	chr11:34893992-35395190	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	nsv430371	chr11:34975067-35111292	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
4	esv1826391	chr11:35000983-35098193	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:9)

SNP	Gene	Cis/trans	Tissue	Source
rs2025780	APIP	cis	Lymphoblastoid	GTEx
rs2025780	APIP	cis	lung	GTEx
rs2025780	APIP	cis	Adipose Subcutaneous	GTEx
rs2025780	APIP	cis	multi-tissue	Pritchard
rs2025780	APIP	cis	Esophagus Muscularis	GTEx
rs2025780	APIP	cis	Thyroid	GTEx
rs2025780	APIP	cis	Skin Sun Exposed Lower leg	GTEx
rs2025780	MMRP19	cis	multi-tissue	Pritchard
rs2025780	PDHX	cis	Skin Sun Exposed Lower leg	GTEx

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34948000-35006800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
2	chr11:34952200-35010800	Weak transcription	Small Intestine	intestine
3	chr11:34959000-35019600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr11:34962000-35008200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr11:34962800-35006600	Weak transcription	Esophagus	oesophagus
6	chr11:34965400-35008200	Weak transcription	Gastric	stomach
7	chr11:34975400-35006800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr11:34976600-35018400	Weak transcription	Spleen	Spleen
9	chr11:34977800-35009800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr11:34982200-35014200	Weak transcription	Fetal Brain Male	brain
11	chr11:34983400-35006800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
12	chr11:34983400-35008200	Weak transcription	Aorta	Aorta
13	chr11:34983600-35018200	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr11:34985200-35026600	Weak transcription	Colonic Mucosa	Colon
15	chr11:34987000-35008200	Weak transcription	Pancreas	Pancrea
16	chr11:34987000-35017000	Weak transcription	K562	blood
17	chr11:34991000-35020800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr11:34991800-35006600	Weak transcription	Fetal Intestine Small	intestine
19	chr11:34992400-35009400	Weak transcription	GM12878-XiMat	blood
20	chr11:34992400-35016600	Weak transcription	Fetal Heart	heart
21	chr11:34997600-35019600	Weak transcription	Fetal Kidney	kidney
22	chr11:34998600-35006800	Weak transcription	Primary neutrophils fromperipheralblood	blood
23	chr11:34999000-35018600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
24	chr11:35000200-35008400	Weak transcription	Pancreatic Islets	Pancreatic Islet
25	chr11:35000400-35007000	Weak transcription	Brain Hippocampus Middle	brain
26	chr11:35000400-35009400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
27	chr11:35000600-35006800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr11:35000600-35035000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr11:35000800-35006600	Weak transcription	Brain Cingulate Gyrus	brain
30	chr11:35000800-35006600	Weak transcription	Fetal Stomach	stomach
31	chr11:35000800-35009800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr11:35000800-35010600	Weak transcription	Primary T cells from cord blood	blood
33	chr11:35000800-35013200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr11:35000800-35018200	Weak transcription	Brain Substantia Nigra	brain
35	chr11:35000800-35019600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
36	chr11:35000800-35019800	Weak transcription	Skeletal Muscle Male	skeletal muscle
37	chr11:35000800-35031000	Weak transcription	Stomach Smooth Muscle	stomach
38	chr11:35001000-35006600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr11:35001000-35006600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr11:35001000-35006600	Weak transcription	Psoas Muscle	Psoas
41	chr11:35001000-35006600	Weak transcription	Right Ventricle	heart
42	chr11:35001000-35006600	Weak transcription	NHDF-Ad	bronchial
43	chr11:35001000-35006800	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr11:35001000-35014400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
45	chr11:35001000-35019600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr11:35001000-35019600	Weak transcription	Rectal Smooth Muscle	rectum
47	chr11:35001000-35019600	Weak transcription	HMEC	breast
48	chr11:35001000-35021200	Weak transcription	Lung	lung
49	chr11:35001200-35019600	Weak transcription	NHEK	skin
50	chr11:35002400-35006800	Weak transcription	Brain Angular Gyrus	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links