The 2.0 version of rSNPBase

Variant report

Variant rs2243948
Chromosome Location chr11:34978892-34978893
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34938800-34990400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr11:34939200-35000000 Weak transcription Thymus Thymus
3 chr11:34940200-34984800 Weak transcription Fetal Stomach stomach
4 chr11:34948000-34990600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr11:34948000-35000400 Weak transcription Stomach Smooth Muscle stomach
6 chr11:34948000-35006800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr11:34948200-34997000 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr11:34948600-34990400 Weak transcription HUVEC blood vessel
9 chr11:34949200-34990400 Weak transcription NHEK skin
10 chr11:34950400-34991600 Weak transcription NHLF lung
11 chr11:34951000-34981400 Weak transcription Brain Cingulate Gyrus brain
12 chr11:34951400-34986600 Weak transcription Fetal Thymus thymus
13 chr11:34951600-34992000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr11:34951800-34985000 Weak transcription Lung lung
15 chr11:34951800-34988200 Weak transcription Fetal Intestine Small intestine
16 chr11:34951800-35000200 Weak transcription Psoas Muscle Psoas
17 chr11:34952200-35010800 Weak transcription Small Intestine intestine
18 chr11:34952400-34990200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr11:34954600-34986600 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr11:34954600-34987800 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr11:34954600-34991200 Weak transcription Muscle Satellite Cultured Cells --
22 chr11:34954800-34988200 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr11:34955000-34988200 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr11:34955400-34985200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr11:34955400-34989000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr11:34955800-34979200 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr11:34955800-34981200 Weak transcription Brain Anterior Caudate brain
28 chr11:34955800-34985000 Weak transcription Placenta Placenta
29 chr11:34956200-34980800 Weak transcription Duodenum Mucosa Duodenum
30 chr11:34956400-34990600 Weak transcription Fetal Muscle Trunk muscle
31 chr11:34958200-34991600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr11:34958200-34995600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr11:34959000-34979000 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr11:34959000-35019600 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr11:34960400-34986600 Weak transcription K562 blood
36 chr11:34960600-34983200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr11:34960800-34981000 Weak transcription Brain Inferior Temporal Lobe brain
38 chr11:34961400-34990400 Weak transcription Osteobl bone
39 chr11:34961800-34997200 Weak transcription HSMMtube muscle
40 chr11:34962000-35008200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr11:34962600-34998000 Weak transcription Rectal Smooth Muscle rectum
42 chr11:34962800-35006600 Weak transcription Esophagus oesophagus
43 chr11:34963600-34979000 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr11:34963600-34984800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr11:34963600-34986600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr11:34963600-34988200 Weak transcription Right Ventricle heart
47 chr11:34963800-34979000 Weak transcription Fetal Intestine Large intestine
48 chr11:34963800-34985000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr11:34963800-34986600 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr11:34963800-34993800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015