The 2.0 version of rSNPBase

Variant report

Variant rs497109
Chromosome Location chr11:35032241-35032242
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:35000600-35035000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr11:35007200-35035200 Weak transcription Fetal Stomach stomach
3 chr11:35019800-35035400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr11:35025400-35035200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr11:35028200-35033200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr11:35028400-35032800 Enhancers Skeletal Muscle Female skeletal muscle
7 chr11:35028400-35033800 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr11:35028400-35039600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr11:35028600-35033200 Weak transcription Primary T cells fromperipheralblood blood
10 chr11:35028600-35033600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr11:35028600-35051600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr11:35029200-35033200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr11:35029200-35033200 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr11:35029200-35033400 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr11:35029200-35033400 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr11:35029200-35033600 Weak transcription Primary B cells from cord blood blood
17 chr11:35029200-35033800 Weak transcription Primary B cells from peripheral blood blood
18 chr11:35029200-35033800 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr11:35029600-35032600 Enhancers Pancreas Pancrea
20 chr11:35029600-35033200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr11:35029600-35036200 Enhancers Fetal Muscle Leg muscle
22 chr11:35029800-35032400 Enhancers Psoas Muscle Psoas
23 chr11:35029800-35033600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr11:35029800-35034200 Enhancers NHDF-Ad bronchial
25 chr11:35030000-35035000 Weak transcription Primary monocytes fromperipheralblood blood
26 chr11:35030000-35035000 Weak transcription Adipose Nuclei Adipose
27 chr11:35030000-35037400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr11:35030200-35033200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr11:35030400-35032600 Flanking Active TSS Hela-S3 cervix
30 chr11:35030400-35033200 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr11:35030400-35033200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr11:35030400-35033400 Enhancers Muscle Satellite Cultured Cells --
33 chr11:35030400-35033600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr11:35030400-35036000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr11:35030600-35033000 Enhancers HepG2 liver
36 chr11:35030600-35033400 Enhancers Osteobl bone
37 chr11:35030800-35034400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr11:35031000-35032600 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr11:35031000-35033000 Weak transcription GM12878-XiMat blood
40 chr11:35031200-35032400 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr11:35031200-35032400 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr11:35031200-35032400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr11:35031200-35033200 Weak transcription Placenta Placenta
44 chr11:35031200-35033800 Weak transcription Thymus Thymus
45 chr11:35031200-35034800 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr11:35031400-35032400 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr11:35031400-35032600 Enhancers HMEC breast
48 chr11:35031400-35032800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr11:35031400-35035400 Weak transcription Colon Smooth Muscle Colon
50 chr11:35031600-35032600 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015