The 2.0 version of rSNPBase

Variant report

Variant rs2732531
Chromosome Location chr11:35030684-35030685
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:35000600-35035000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr11:35000800-35031000 Weak transcription Stomach Smooth Muscle stomach
3 chr11:35007200-35035200 Weak transcription Fetal Stomach stomach
4 chr11:35008600-35030800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr11:35017200-35030800 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr11:35019800-35035400 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr11:35025400-35030800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr11:35025400-35035200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr11:35025600-35030800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr11:35025600-35030800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr11:35026600-35032000 Enhancers Stomach Mucosa stomach
12 chr11:35027000-35030800 Weak transcription Fetal Intestine Large intestine
13 chr11:35027000-35032200 Enhancers Duodenum Mucosa Duodenum
14 chr11:35027200-35030800 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr11:35027800-35031600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr11:35028000-35031000 Enhancers Small Intestine intestine
17 chr11:35028200-35033200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr11:35028400-35032800 Enhancers Skeletal Muscle Female skeletal muscle
19 chr11:35028400-35033800 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr11:35028400-35039600 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr11:35028600-35032000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr11:35028600-35033200 Weak transcription Primary T cells fromperipheralblood blood
23 chr11:35028600-35033600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr11:35028600-35051600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr11:35029000-35030800 Weak transcription HSMMtube muscle
26 chr11:35029200-35033200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr11:35029200-35033200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr11:35029200-35033400 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr11:35029200-35033400 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr11:35029200-35033600 Weak transcription Primary B cells from cord blood blood
31 chr11:35029200-35033800 Weak transcription Primary B cells from peripheral blood blood
32 chr11:35029200-35033800 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr11:35029600-35032600 Enhancers Pancreas Pancrea
34 chr11:35029600-35033200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr11:35029600-35036200 Enhancers Fetal Muscle Leg muscle
36 chr11:35029800-35030800 Enhancers HMEC breast
37 chr11:35029800-35031200 Enhancers Rectal Mucosa Donor 29 rectum
38 chr11:35029800-35032200 Enhancers Rectal Mucosa Donor 31 rectum
39 chr11:35029800-35032400 Enhancers Psoas Muscle Psoas
40 chr11:35029800-35033600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr11:35029800-35034200 Enhancers NHDF-Ad bronchial
42 chr11:35030000-35030800 Enhancers NHEK skin
43 chr11:35030000-35031000 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr11:35030000-35031000 Enhancers GM12878-XiMat blood
45 chr11:35030000-35031200 Weak transcription Colonic Mucosa Colon
46 chr11:35030000-35031400 Weak transcription Left Ventricle heart
47 chr11:35030000-35032000 Weak transcription Gastric stomach
48 chr11:35030000-35035000 Weak transcription Primary monocytes fromperipheralblood blood
49 chr11:35030000-35035000 Weak transcription Adipose Nuclei Adipose
50 chr11:35030000-35037400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015