The 2.0 version of rSNPBase

Variant report

Variant rs2762969
Chromosome Location chr11:35025682-35025683
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34985200-35026600 Weak transcription Colonic Mucosa Colon
2 chr11:35000600-35035000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:35000800-35031000 Weak transcription Stomach Smooth Muscle stomach
4 chr11:35007000-35026600 Weak transcription Fetal Intestine Small intestine
5 chr11:35007000-35028000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr11:35007000-35029800 Weak transcription Esophagus oesophagus
7 chr11:35007200-35035200 Weak transcription Fetal Stomach stomach
8 chr11:35007400-35026600 Weak transcription Fetal Intestine Large intestine
9 chr11:35007400-35026800 Weak transcription Fetal Brain Female brain
10 chr11:35007400-35027800 Weak transcription Primary T cells fromperipheralblood blood
11 chr11:35008600-35026600 Weak transcription Fetal Muscle Leg muscle
12 chr11:35008600-35026600 Weak transcription Pancreas Pancrea
13 chr11:35008600-35030800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr11:35009000-35028000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr11:35009400-35026600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr11:35009400-35026800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr11:35011400-35028200 Weak transcription HSMMtube muscle
18 chr11:35011600-35026800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr11:35016800-35026600 Weak transcription Liver Liver
20 chr11:35016800-35026800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr11:35017200-35030800 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr11:35019800-35035400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr11:35020000-35028000 Weak transcription Small Intestine intestine
24 chr11:35020000-35030400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr11:35020200-35026600 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr11:35020200-35028200 Weak transcription Fetal Lung lung
27 chr11:35020200-35028400 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr11:35020200-35029800 Weak transcription NHDF-Ad bronchial
29 chr11:35021400-35026600 Weak transcription Stomach Mucosa stomach
30 chr11:35021400-35026600 Weak transcription NHEK skin
31 chr11:35021400-35029400 Weak transcription Hela-S3 cervix
32 chr11:35021800-35026800 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr11:35022000-35026800 Weak transcription Left Ventricle heart
34 chr11:35022000-35027400 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr11:35022000-35028000 Weak transcription Gastric stomach
36 chr11:35024400-35025800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr11:35024800-35025800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr11:35025000-35025800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr11:35025000-35026800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr11:35025200-35026600 Enhancers Rectal Mucosa Donor 29 rectum
41 chr11:35025400-35026200 Flanking Active TSS A549 lung
42 chr11:35025400-35027600 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr11:35025400-35027600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr11:35025400-35029800 Weak transcription HMEC breast
45 chr11:35025400-35030800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr11:35025400-35035200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr11:35025600-35026600 Weak transcription Psoas Muscle Psoas
48 chr11:35025600-35026800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr11:35025600-35027000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr11:35025600-35027000 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015