The 2.0 version of rSNPBase

Variant report

Variant rs59318206
Chromosome Location chr1:63270272-63270273
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63250800-63319000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:63251000-63272600 Weak transcription Fetal Muscle Leg muscle
3 chr1:63251000-63274800 Weak transcription Fetal Intestine Small intestine
4 chr1:63251000-63296000 Weak transcription Fetal Thymus thymus
5 chr1:63251000-63317800 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:63251000-63327400 Weak transcription Fetal Stomach stomach
7 chr1:63251200-63327400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:63251400-63275600 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr1:63251800-63273000 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr1:63252000-63284400 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr1:63252800-63272400 Weak transcription Primary T cells from cord blood blood
12 chr1:63257400-63293400 Weak transcription Brain Anterior Caudate brain
13 chr1:63260200-63273000 Weak transcription Brain Inferior Temporal Lobe brain
14 chr1:63261600-63326400 Weak transcription Placenta Placenta
15 chr1:63262800-63276000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr1:63262800-63293000 Weak transcription Brain Substantia Nigra brain
17 chr1:63263000-63273000 Weak transcription Brain Cingulate Gyrus brain
18 chr1:63263400-63274800 Weak transcription Primary T cells fromperipheralblood blood
19 chr1:63264800-63282800 Weak transcription Left Ventricle heart
20 chr1:63265800-63272200 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr1:63266200-63276200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:63266600-63270600 Enhancers Primary B cells from cord blood blood
23 chr1:63266800-63272400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr1:63266800-63284600 Weak transcription Fetal Kidney kidney
25 chr1:63267000-63274600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:63267000-63276000 Weak transcription Fetal Lung lung
27 chr1:63267000-63279800 Weak transcription Rectal Smooth Muscle rectum
28 chr1:63267200-63271400 Weak transcription Primary hematopoietic stem cells blood
29 chr1:63267200-63274400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:63267200-63275800 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr1:63267200-63327000 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:63267200-63327400 Weak transcription Colon Smooth Muscle Colon
33 chr1:63267400-63271400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:63267400-63272400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:63267400-63272800 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr1:63267400-63274000 Weak transcription GM12878-XiMat blood
37 chr1:63267400-63276000 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr1:63267400-63283400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:63267600-63287200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr1:63268000-63278800 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr1:63268200-63272400 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr1:63268400-63297000 Weak transcription Brain Hippocampus Middle brain
43 chr1:63268600-63276600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr1:63268600-63319600 Weak transcription Liver Liver
45 chr1:63268800-63276000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr1:63268800-63276000 Weak transcription Adipose Nuclei Adipose
47 chr1:63268800-63317600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:63269200-63272600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr1:63269200-63317400 Weak transcription Dnd41 blood
50 chr1:63269400-63271000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015