Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10493330	1.00[CEU][hapmap];0.83[AMR][1000 genomes]
rs11808188	1.00[CEU][hapmap]
rs17123771	1.00[CEU][hapmap]
rs17123998	0.83[AMR][1000 genomes]
rs57064478	0.83[AMR][1000 genomes]
rs57754785	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58234250	0.83[AMR][1000 genomes]
rs58800232	0.83[AMR][1000 genomes]
rs59318206	0.83[AMR][1000 genomes]
rs59429889	0.83[AMR][1000 genomes]
rs60452972	0.83[AMR][1000 genomes]
rs60646258	0.83[AMR][1000 genomes]
rs60829308	0.83[AMR][1000 genomes]
rs60850541	0.83[AMR][1000 genomes]
rs61314361	0.83[AMR][1000 genomes]
rs6661082	1.00[CEU][hapmap];1.00[MEX][hapmap]
rs6661162	1.00[CEU][hapmap];1.00[MEX][hapmap];0.83[AMR][1000 genomes]
rs6661179	1.00[CEU][hapmap]
rs6702884	0.83[AMR][1000 genomes]
rs72915168	0.83[AMR][1000 genomes]
rs72915179	0.83[AMR][1000 genomes]
rs72917211	0.83[AMR][1000 genomes]
rs72917229	0.83[AMR][1000 genomes]
rs72917233	0.83[AMR][1000 genomes]
rs72917235	0.83[AMR][1000 genomes]
rs72917236	0.83[AMR][1000 genomes]
rs72917258	0.83[AMR][1000 genomes]
rs72917264	1.00[AMR][1000 genomes]
rs72917293	0.88[AFR][1000 genomes]
rs72919125	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7524516	0.83[AMR][1000 genomes]
rs7533847	1.00[CEU][hapmap]
rs7556456	1.00[CEU][hapmap];0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830015	chr1:63261143-63455296	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:63298400-63345800	Weak transcription	Left Ventricle	heart
2	chr1:63310000-63340600	Weak transcription	Brain Substantia Nigra	brain
3	chr1:63312000-63335200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:63312200-63335000	Weak transcription	Duodenum Mucosa	Duodenum
5	chr1:63324200-63334000	Weak transcription	Fetal Intestine Large	intestine
6	chr1:63326600-63333800	Weak transcription	Primary B cells from cord blood	blood

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