The 2.0 version of rSNPBase

Variant report

Variant rs60829308
Chromosome Location chr1:63280600-63280601
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63250800-63319000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:63251000-63296000 Weak transcription Fetal Thymus thymus
3 chr1:63251000-63317800 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr1:63251000-63327400 Weak transcription Fetal Stomach stomach
5 chr1:63251200-63327400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:63252000-63284400 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr1:63257400-63293400 Weak transcription Brain Anterior Caudate brain
8 chr1:63261600-63326400 Weak transcription Placenta Placenta
9 chr1:63262800-63293000 Weak transcription Brain Substantia Nigra brain
10 chr1:63264800-63282800 Weak transcription Left Ventricle heart
11 chr1:63266800-63284600 Weak transcription Fetal Kidney kidney
12 chr1:63267200-63327000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:63267200-63327400 Weak transcription Colon Smooth Muscle Colon
14 chr1:63267400-63283400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:63267600-63287200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr1:63268400-63297000 Weak transcription Brain Hippocampus Middle brain
17 chr1:63268600-63319600 Weak transcription Liver Liver
18 chr1:63268800-63317600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:63269200-63317400 Weak transcription Dnd41 blood
20 chr1:63269600-63309600 Weak transcription Brain Angular Gyrus brain
21 chr1:63270000-63286000 Weak transcription Fetal Intestine Large intestine
22 chr1:63270200-63287400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:63270400-63331400 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:63271400-63324400 Weak transcription Pancreas Pancrea
25 chr1:63271600-63326800 Weak transcription Aorta Aorta
26 chr1:63271600-63327400 Weak transcription Thymus Thymus
27 chr1:63271800-63324000 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr1:63272400-63282200 Weak transcription Fetal Heart heart
29 chr1:63272400-63282600 Weak transcription Stomach Smooth Muscle stomach
30 chr1:63273000-63311600 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr1:63273200-63291000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr1:63273200-63299000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr1:63273200-63306400 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr1:63273200-63313800 Weak transcription HSMM muscle
35 chr1:63273400-63285200 Weak transcription Fetal Muscle Leg muscle
36 chr1:63273600-63289000 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:63273600-63322400 Weak transcription Ovary ovary
38 chr1:63273800-63329000 Weak transcription Brain Cingulate Gyrus brain
39 chr1:63274000-63292600 Weak transcription Primary T cells from cord blood blood
40 chr1:63274600-63294200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr1:63275000-63321400 Weak transcription Fetal Intestine Small intestine
42 chr1:63275400-63293000 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr1:63275800-63289200 Weak transcription NH-A brain
44 chr1:63276000-63322800 Weak transcription H1 Cell Line embryonic stem cell
45 chr1:63276400-63295200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr1:63276400-63311600 Weak transcription Primary hematopoietic stem cells blood
47 chr1:63276400-63312200 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr1:63276400-63322600 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr1:63276600-63299800 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr1:63276600-63323200 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015