The 2.0 version of rSNPBase

Variant report

Variant rs596494
Chromosome Location chr11:68251054-68251055
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:68238200-68264800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr11:68238600-68287800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr11:68239600-68254200 Weak transcription HUVEC blood vessel
4 chr11:68240000-68251400 Weak transcription Fetal Kidney kidney
5 chr11:68240000-68269800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr11:68240200-68255400 Weak transcription NHEK skin
7 chr11:68240400-68262200 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr11:68240400-68262200 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr11:68240800-68262200 Weak transcription Primary monocytes fromperipheralblood blood
10 chr11:68241200-68253000 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr11:68241200-68259400 Weak transcription Thymus Thymus
12 chr11:68241200-68264800 Weak transcription K562 blood
13 chr11:68242000-68266000 Weak transcription Hela-S3 cervix
14 chr11:68242200-68252200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr11:68244000-68255800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr11:68244400-68255600 Weak transcription H1 Cell Line embryonic stem cell
17 chr11:68244600-68255800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr11:68245000-68251400 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr11:68245000-68256200 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr11:68245000-68264800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr11:68245800-68251400 Enhancers Primary T helper cells fromperipheralblood blood
22 chr11:68246600-68251800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr11:68246800-68253200 Weak transcription Fetal Muscle Trunk muscle
24 chr11:68246800-68266600 Weak transcription Fetal Thymus thymus
25 chr11:68247000-68270800 Weak transcription Dnd41 blood
26 chr11:68247400-68252800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr11:68247400-68256000 Weak transcription Aorta Aorta
28 chr11:68247400-68257200 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr11:68247400-68264800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr11:68247600-68251200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr11:68247600-68251200 Weak transcription Primary hematopoietic stem cells blood
32 chr11:68247600-68253200 Weak transcription Fetal Intestine Small intestine
33 chr11:68248000-68254200 Weak transcription GM12878-XiMat blood
34 chr11:68248800-68266000 Weak transcription HSMM muscle
35 chr11:68249000-68251600 Weak transcription Fetal Brain Female brain
36 chr11:68249000-68255600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr11:68249000-68256600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr11:68249000-68258200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr11:68249000-68265400 Weak transcription Muscle Satellite Cultured Cells --
40 chr11:68249000-68270000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr11:68249200-68253000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr11:68249200-68255400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr11:68249200-68255600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr11:68249200-68256200 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr11:68249200-68258000 Weak transcription Brain Hippocampus Middle brain
46 chr11:68249200-68262400 Weak transcription Brain Cingulate Gyrus brain
47 chr11:68249400-68252400 Weak transcription Primary T cells from cord blood blood
48 chr11:68249400-68252800 Weak transcription Primary B cells from peripheral blood blood
49 chr11:68249400-68252800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr11:68249400-68253200 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015