Variant report
| Variant | rs643609 |
|---|---|
| Chromosome Location | chr11:68241833-68241834 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:68234400-68242000 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 2 | chr11:68234600-68242000 | Enhancers | Brain Angular Gyrus | brain |
| 3 | chr11:68238200-68242200 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr11:68238200-68264800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 5 | chr11:68238400-68247600 | Weak transcription | Stomach Mucosa | stomach |
| 6 | chr11:68238600-68287800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 7 | chr11:68238800-68242000 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
| 8 | chr11:68238800-68242400 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 9 | chr11:68239000-68242000 | ZNF genes & repeats | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 10 | chr11:68239200-68249200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 11 | chr11:68239400-68242200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 12 | chr11:68239400-68242200 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 13 | chr11:68239400-68244200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 14 | chr11:68239400-68246600 | Weak transcription | Aorta | Aorta |
| 15 | chr11:68239400-68248600 | Weak transcription | Esophagus | oesophagus |
| 16 | chr11:68239600-68242000 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 17 | chr11:68239600-68242000 | Enhancers | Colon Smooth Muscle | Colon |
| 18 | chr11:68239600-68243200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 19 | chr11:68239600-68243200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 20 | chr11:68239600-68243400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 21 | chr11:68239600-68247600 | Weak transcription | Brain Substantia Nigra | brain |
| 22 | chr11:68239600-68248200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 23 | chr11:68239600-68248400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr11:68239600-68254200 | Weak transcription | HUVEC | blood vessel |
| 25 | chr11:68239800-68242800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 26 | chr11:68239800-68244200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 27 | chr11:68239800-68247600 | Weak transcription | Fetal Heart | heart |
| 28 | chr11:68239800-68247800 | Weak transcription | HSMMtube | muscle |
| 29 | chr11:68239800-68248000 | Weak transcription | HSMM | muscle |
| 30 | chr11:68239800-68248400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 31 | chr11:68239800-68248600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 32 | chr11:68239800-68248600 | Weak transcription | Pancreas | Pancrea |
| 33 | chr11:68240000-68242000 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 34 | chr11:68240000-68242200 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 35 | chr11:68240000-68242600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 36 | chr11:68240000-68244200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 37 | chr11:68240000-68244200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 38 | chr11:68240000-68247400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 39 | chr11:68240000-68247800 | Weak transcription | Brain Anterior Caudate | brain |
| 40 | chr11:68240000-68247800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 41 | chr11:68240000-68248000 | Weak transcription | NHLF | lung |
| 42 | chr11:68240000-68249200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 43 | chr11:68240000-68251400 | Weak transcription | Fetal Kidney | kidney |
| 44 | chr11:68240000-68269800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 45 | chr11:68240200-68242000 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 46 | chr11:68240200-68242200 | Strong transcription | Primary B cells from cord blood | blood |
| 47 | chr11:68240200-68255400 | Weak transcription | NHEK | skin |
| 48 | chr11:68240400-68242600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 49 | chr11:68240400-68262200 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 50 | chr11:68240400-68262200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
