The 2.0 version of rSNPBase

Variant report

Variant rs60055251
Chromosome Location chr1:173498617-173498618
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173495000-173500200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr1:173496400-173498800 Enhancers iPS-20b Cell Line embryonic stem cell
3 chr1:173496400-173501200 Enhancers HUES6 Cell Line embryonic stem cell
4 chr1:173496400-173501800 Enhancers Cortex derived primary cultured neurospheres brain
5 chr1:173496600-173498800 Enhancers HUES48 Cell Line embryonic stem cell
6 chr1:173496600-173499000 Enhancers HUES64 Cell Line embryonic stem cell
7 chr1:173496800-173499200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:173496800-173499200 Weak transcription Placenta Placenta
9 chr1:173496800-173500400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:173496800-173501200 Enhancers ES-I3 Cell Line embryonic stem cell
11 chr1:173496800-173501600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:173497000-173500400 Weak transcription Adipose Nuclei Adipose
13 chr1:173497200-173499400 Enhancers Primary T helper cells fromperipheralblood blood
14 chr1:173497200-173500400 Weak transcription H9 Cell Line embryonic stem cell
15 chr1:173497400-173500400 Weak transcription Brain Substantia Nigra brain
16 chr1:173497600-173498800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr1:173497600-173499000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr1:173497600-173500400 Weak transcription H1 Cell Line embryonic stem cell
19 chr1:173497800-173498800 Enhancers Primary T cells from cord blood blood
20 chr1:173497800-173499200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr1:173497800-173499800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:173497800-173500000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:173498000-173498800 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr1:173498000-173499800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:173498200-173499800 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr1:173498400-173498800 Enhancers K562 blood
27 chr1:173498400-173499600 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr1:173498600-173498800 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr1:173498600-173498800 Enhancers Primary T regulatory cells fromperipheralblood blood
30 chr1:173498600-173499200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr1:173498600-173501000 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr1:173498600-173501400 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015