Variant report

Variant	rs60806144
Chromosome Location	chr6:54485366-54485367
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs1039699	0.92[EUR][1000 genomes]
rs10484986	0.95[EUR][1000 genomes]
rs12333250	0.95[EUR][1000 genomes]
rs12333325	0.95[EUR][1000 genomes]
rs1395625	0.83[EUR][1000 genomes]
rs1395630	0.83[EUR][1000 genomes]
rs16885565	0.94[EUR][1000 genomes]
rs16885575	0.95[EUR][1000 genomes]
rs16885845	0.83[EUR][1000 genomes]
rs16885849	0.83[EUR][1000 genomes]
rs17443543	0.97[EUR][1000 genomes]
rs17446535	0.83[EUR][1000 genomes]
rs17540495	0.95[EUR][1000 genomes]
rs17540835	0.97[EUR][1000 genomes]
rs541689	0.83[AFR][1000 genomes]
rs56210129	0.92[EUR][1000 genomes]
rs73743735	0.83[EUR][1000 genomes]
rs73743738	0.83[EUR][1000 genomes]
rs73743739	0.83[EUR][1000 genomes]
rs73743740	0.83[EUR][1000 genomes]
rs7755519	0.90[ASN][1000 genomes]
rs7759564	0.95[EUR][1000 genomes]
rs7766941	0.87[AFR][1000 genomes]
rs7771064	0.95[EUR][1000 genomes]
rs7771536	0.95[EUR][1000 genomes]
rs7771554	0.95[EUR][1000 genomes]
rs9296762	0.83[EUR][1000 genomes]
rs9464104	0.95[EUR][1000 genomes]
rs9464105	0.95[EUR][1000 genomes]
rs9464106	0.95[EUR][1000 genomes]
rs9464108	0.95[EUR][1000 genomes]
rs9474920	0.92[EUR][1000 genomes]
rs9474921	0.95[EUR][1000 genomes]
rs9474922	0.95[EUR][1000 genomes]
rs9474923	0.95[EUR][1000 genomes]
rs9474924	0.95[EUR][1000 genomes]
rs9474926	0.95[EUR][1000 genomes]
rs9474927	0.95[EUR][1000 genomes]
rs9474928	0.95[EUR][1000 genomes]
rs9474929	0.95[EUR][1000 genomes]
rs9474930	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427757	chr6:54296552-54507210	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54480000-54489600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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