Variant report
| Variant | rs61360705 |
|---|---|
| Chromosome Location | chr10:22406564-22406565 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:4 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:22404725..22406792-chr10:22604103..22606603,2 | MCF-7 | breast: | |
| 2 | chr10:22403875..22406651-chr10:22610131..22612902,2 | MCF-7 | breast: | |
| 3 | chr10:22290988..22293284-chr10:22404226..22407106,2 | MCF-7 | breast: | |
| 4 | chr10:22406195..22409091-chr10:23343391..23344898,2 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000148444 | Chromatin interaction |
| ENSG00000136770 | Chromatin interaction |
| ENSG00000168283 | Chromatin interaction |
| ENSG00000269897 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:27)
| rs_ID | r2[population] |
|---|---|
| rs11012863 | 1.00[EUR][1000 genomes] |
| rs11812874 | 1.00[EUR][1000 genomes] |
| rs11815966 | 1.00[EUR][1000 genomes] |
| rs11818798 | 1.00[EUR][1000 genomes] |
| rs11819144 | 1.00[EUR][1000 genomes] |
| rs12252861 | 1.00[EUR][1000 genomes] |
| rs12262626 | 1.00[EUR][1000 genomes] |
| rs12269178 | 1.00[EUR][1000 genomes] |
| rs58659665 | 1.00[EUR][1000 genomes] |
| rs59376688 | 1.00[EUR][1000 genomes] |
| rs59770190 | 1.00[EUR][1000 genomes] |
| rs59966419 | 1.00[EUR][1000 genomes] |
| rs61459152 | 1.00[EUR][1000 genomes] |
| rs61702317 | 1.00[EUR][1000 genomes] |
| rs7070435 | 1.00[EUR][1000 genomes] |
| rs7085894 | 1.00[EUR][1000 genomes] |
| rs7090197 | 1.00[EUR][1000 genomes] |
| rs7095916 | 1.00[EUR][1000 genomes] |
| rs7099490 | 1.00[EUR][1000 genomes] |
| rs73596583 | 1.00[EUR][1000 genomes] |
| rs73596584 | 1.00[EUR][1000 genomes] |
| rs73596585 | 1.00[EUR][1000 genomes] |
| rs73596586 | 1.00[EUR][1000 genomes] |
| rs74121327 | 1.00[EUR][1000 genomes] |
| rs74122772 | 1.00[EUR][1000 genomes] |
| rs7905092 | 1.00[EUR][1000 genomes] |
| rs7923420 | 1.00[EUR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
