Variant report
| Variant | rs59966419 |
|---|---|
| Chromosome Location | chr10:22488311-22488312 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:22488241..22490225-chr10:22491086..22493892,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs11012852 | 1.00[AMR][1000 genomes] |
| rs11012858 | 1.00[ASN][1000 genomes] |
| rs11012863 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11812874 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11815966 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11818798 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11819144 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12252861 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12262626 | 1.00[EUR][1000 genomes] |
| rs12269178 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4440933 | 1.00[ASN][1000 genomes] |
| rs56788602 | 1.00[AMR][1000 genomes] |
| rs58394719 | 1.00[AMR][1000 genomes] |
| rs58483142 | 1.00[ASN][1000 genomes] |
| rs58659665 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs59376688 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs59770190 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs60504292 | 1.00[ASN][1000 genomes] |
| rs61184296 | 1.00[AMR][1000 genomes] |
| rs61360705 | 1.00[EUR][1000 genomes] |
| rs61459152 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs61702317 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6482196 | 1.00[AMR][1000 genomes] |
| rs7067664 | 1.00[AMR][1000 genomes] |
| rs7069403 | 1.00[AMR][1000 genomes] |
| rs7069565 | 1.00[ASN][1000 genomes] |
| rs7070435 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7076741 | 1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7085894 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7090197 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7095916 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7099490 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73596583 | 1.00[EUR][1000 genomes] |
| rs73596584 | 1.00[EUR][1000 genomes] |
| rs73596585 | 1.00[EUR][1000 genomes] |
| rs73596586 | 1.00[EUR][1000 genomes] |
| rs74121327 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs74122772 | 1.00[EUR][1000 genomes] |
| rs7905092 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7923420 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:22485600-22489200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
