Variant report

Variant	rs12252861
Chromosome Location	chr10:22424827-22424828
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22332105..22334071-chr10:22423045..22425409,2	K562	blood:
2	chr10:22423727..22426260-chr10:22429359..22431738,2	K562	blood:
3	chr10:22420199..22422040-chr10:22422230..22425211,2	K562	blood:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10466081	1.00[CHB][hapmap]
rs10508640	1.00[CHB][hapmap]
rs10508642	1.00[CHB][hapmap]
rs11012858	1.00[ASN][1000 genomes]
rs11012863	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11012872	0.89[AMR][1000 genomes]
rs11012890	1.00[CHB][hapmap]
rs11012892	1.00[CHB][hapmap]
rs11012894	1.00[CHB][hapmap]
rs11812874	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11815966	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11816093	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs11818798	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11819144	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12262626	1.00[EUR][1000 genomes]
rs12263070	1.00[CHB][hapmap]
rs12269178	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16922008	1.00[CHB][hapmap]
rs16922014	1.00[CHB][hapmap]
rs16922112	1.00[CHB][hapmap]
rs4440933	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58483142	1.00[ASN][1000 genomes]
rs58659665	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59376688	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59770190	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59966419	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60504292	1.00[ASN][1000 genomes]
rs61360705	1.00[EUR][1000 genomes]
rs61459152	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61702317	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7069565	1.00[ASN][1000 genomes]
rs7070435	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7076741	1.00[ASN][1000 genomes]
rs7085894	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7090197	1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7095916	1.00[CHB][hapmap];0.85[YRI][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7099490	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73596583	1.00[EUR][1000 genomes]
rs73596584	1.00[EUR][1000 genomes]
rs73596585	1.00[EUR][1000 genomes]
rs73596586	1.00[EUR][1000 genomes]
rs74121327	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74122772	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7905092	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7923420	1.00[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22422800-22425000	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr10:22423600-22429600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr10:22423600-22429600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:22424200-22426600	Weak transcription	Primary hematopoietic stem cells	blood
5	chr10:22424600-22425400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr10:22424600-22425400	Enhancers	Spleen	Spleen

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