Variant report

Variant	rs59770190
Chromosome Location	chr10:22399677-22399678
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:22394672..22397312-chr10:22397566..22400012,2	MCF-7	breast:

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11012858	1.00[ASN][1000 genomes]
rs11012863	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11012872	1.00[AMR][1000 genomes]
rs11812874	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11815966	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11816093	1.00[AMR][1000 genomes]
rs11818798	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11819144	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12252861	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12262626	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12269178	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4440933	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58483142	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs58659665	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59376688	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59966419	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60504292	1.00[ASN][1000 genomes]
rs61360705	1.00[EUR][1000 genomes]
rs61459152	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61702317	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7069565	1.00[ASN][1000 genomes]
rs7070435	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7076741	1.00[ASN][1000 genomes]
rs7085894	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7090197	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7095916	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7099490	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73596583	1.00[EUR][1000 genomes]
rs73596584	1.00[EUR][1000 genomes]
rs73596585	1.00[EUR][1000 genomes]
rs73596586	1.00[EUR][1000 genomes]
rs74121327	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74122772	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7905092	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7923420	1.00[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22398600-22401000	Enhancers	Fetal Stomach	stomach
2	chr10:22399000-22400800	Enhancers	Fetal Lung	lung
3	chr10:22399600-22400200	Weak transcription	Placenta	Placenta
4	chr10:22399600-22400600	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr10:22399600-22401400	Enhancers	Stomach Smooth Muscle	stomach

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