The 2.0 version of rSNPBase

Variant report

Variant rs61780999
Chromosome Location chr1:94131344-94131345
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94100000-94135800 Weak transcription Fetal Stomach stomach
2 chr1:94103800-94135800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:94115000-94132000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:94123200-94135800 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:94126200-94134600 Weak transcription Primary B cells from cord blood blood
6 chr1:94127000-94132000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:94127000-94133600 Enhancers Ovary ovary
8 chr1:94127200-94134000 Enhancers Placenta Amnion Placenta Amnion
9 chr1:94127400-94132000 Enhancers K562 blood
10 chr1:94127400-94132800 Enhancers Brain Anterior Caudate brain
11 chr1:94127400-94133600 Enhancers Fetal Adrenal Gland Adrenal Gland
12 chr1:94127400-94143800 Genic enhancers HMEC breast
13 chr1:94127400-94144000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:94127800-94134000 Enhancers Colon Smooth Muscle Colon
15 chr1:94128400-94134200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:94128600-94132200 Enhancers HSMMtube muscle
17 chr1:94128800-94131800 Enhancers Right Ventricle heart
18 chr1:94128800-94132400 Enhancers Left Ventricle heart
19 chr1:94128800-94134000 Enhancers Right Atrium heart
20 chr1:94128800-94137800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:94129000-94137000 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:94129200-94131400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:94129200-94132000 Enhancers Fetal Muscle Leg muscle
24 chr1:94129200-94132200 Weak transcription Fetal Kidney kidney
25 chr1:94129200-94132400 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr1:94129200-94132400 Weak transcription Pancreas Pancrea
27 chr1:94129200-94144800 Weak transcription GM12878-XiMat blood
28 chr1:94129400-94132200 Weak transcription Lung lung
29 chr1:94129400-94137600 Weak transcription Stomach Smooth Muscle stomach
30 chr1:94129600-94131800 Enhancers Osteobl bone
31 chr1:94129600-94132000 Enhancers NHLF lung
32 chr1:94129600-94133400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:94129800-94131400 Enhancers iPS-20b Cell Line embryonic stem cell
34 chr1:94129800-94131400 Flanking Active TSS A549 lung
35 chr1:94129800-94131600 Enhancers Rectal Smooth Muscle rectum
36 chr1:94129800-94132000 Enhancers Adipose Nuclei Adipose
37 chr1:94129800-94135000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:94130200-94131400 Enhancers HUES64 Cell Line embryonic stem cell
39 chr1:94130200-94131400 Enhancers Aorta Aorta
40 chr1:94130200-94131600 Enhancers Gastric stomach
41 chr1:94130200-94131800 Enhancers NHDF-Ad bronchial
42 chr1:94130200-94132600 Enhancers Skeletal Muscle Female skeletal muscle
43 chr1:94130200-94132800 Enhancers Skeletal Muscle Male skeletal muscle
44 chr1:94130200-94133400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr1:94130400-94131600 Transcr. at gene 5' and 3' NHEK skin
46 chr1:94130400-94132200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr1:94130400-94132200 Weak transcription Duodenum Mucosa Duodenum
48 chr1:94130400-94134000 Enhancers Esophagus oesophagus
49 chr1:94130600-94131600 Enhancers Psoas Muscle Psoas
50 chr1:94130600-94132000 Weak transcription H1 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015