The 2.0 version of rSNPBase

Variant report

Variant rs6660968
Chromosome Location chr1:94174519-94174520
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94168600-94174600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr1:94169000-94181400 Weak transcription Psoas Muscle Psoas
3 chr1:94169600-94174600 Weak transcription NHLF lung
4 chr1:94169600-94181000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr1:94169800-94174600 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr1:94169800-94175800 Weak transcription K562 blood
7 chr1:94170000-94178800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:94170200-94174600 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:94171800-94174800 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:94172000-94174600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:94172000-94174800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:94172000-94181000 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr1:94172200-94174600 Weak transcription NHDF-Ad bronchial
14 chr1:94172200-94174800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:94172400-94186600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:94172800-94175400 Enhancers Primary B cells from cord blood blood
17 chr1:94173000-94176000 Enhancers Primary B cells from peripheral blood blood
18 chr1:94173200-94175200 Enhancers Primary monocytes fromperipheralblood blood
19 chr1:94173200-94175200 Enhancers Monocytes-CD14+_RO01746 blood
20 chr1:94173400-94175000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:94173400-94175200 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr1:94173400-94175200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:94173400-94175200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:94173400-94175400 Enhancers Cortex derived primary cultured neurospheres brain
25 chr1:94173400-94176800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:94173400-94176800 Enhancers Fetal Lung lung
27 chr1:94173400-94177000 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr1:94173400-94177000 Enhancers HepG2 liver
29 chr1:94173600-94174800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
30 chr1:94173600-94175000 Enhancers Primary T helper cells PMA-I stimulated --
31 chr1:94173600-94175200 Enhancers Primary T cells from cord blood blood
32 chr1:94173600-94175200 Enhancers Right Ventricle heart
33 chr1:94173600-94176200 Enhancers Stomach Mucosa stomach
34 chr1:94173600-94177000 Enhancers Fetal Intestine Small intestine
35 chr1:94173600-94177000 Enhancers Right Atrium heart
36 chr1:94173600-94179400 Enhancers Duodenum Mucosa Duodenum
37 chr1:94173800-94174600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr1:94173800-94175000 Enhancers Primary hematopoietic stem cells blood
39 chr1:94173800-94175000 Enhancers Primary T helper cells fromperipheralblood blood
40 chr1:94173800-94175000 Flanking Active TSS GM12878-XiMat blood
41 chr1:94173800-94175200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr1:94173800-94175200 Enhancers Primary T cells fromperipheralblood blood
43 chr1:94173800-94175200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:94173800-94175200 Enhancers Brain Anterior Caudate brain
45 chr1:94173800-94175200 Enhancers Brain Hippocampus Middle brain
46 chr1:94173800-94175200 Enhancers Esophagus oesophagus
47 chr1:94173800-94175200 Bivalent Enhancer Fetal Heart heart
48 chr1:94173800-94175200 Enhancers Fetal Thymus thymus
49 chr1:94173800-94175800 Enhancers Duodenum Smooth Muscle Duodenum
50 chr1:94173800-94176200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015