The 2.0 version of rSNPBase

Variant report

Variant rs61828577
Chromosome Location chr1:174173231-174173232
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174144000-174178200 Weak transcription Left Ventricle heart
2 chr1:174154200-174173600 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:174160000-174173600 Weak transcription Primary B cells from peripheral blood blood
4 chr1:174160600-174173800 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr1:174160800-174186600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:174161000-174173600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr1:174161000-174176200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:174161200-174176600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:174161600-174175000 Weak transcription NHDF-Ad bronchial
10 chr1:174161600-174178600 Weak transcription Primary B cells from cord blood blood
11 chr1:174161800-174173800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:174162000-174173800 Weak transcription Hela-S3 cervix
13 chr1:174162000-174189600 Weak transcription Duodenum Mucosa Duodenum
14 chr1:174163800-174178200 Weak transcription Primary hematopoietic stem cells blood
15 chr1:174164000-174173800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr1:174167200-174178400 Weak transcription Fetal Stomach stomach
17 chr1:174167400-174175000 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr1:174169200-174173400 Weak transcription Fetal Heart heart
19 chr1:174170200-174173600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr1:174170600-174173400 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr1:174170600-174173600 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr1:174170600-174173800 Weak transcription Dnd41 blood
23 chr1:174170800-174178000 Weak transcription Fetal Intestine Small intestine
24 chr1:174172200-174179800 ZNF genes & repeats GM12878-XiMat blood
25 chr1:174172600-174175600 Weak transcription Primary T cells from cord blood blood
26 chr1:174172800-174174400 Enhancers Primary T helper naive cells fromperipheralblood blood
27 chr1:174172800-174175600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr1:174172800-174190600 Weak transcription Fetal Intestine Large intestine
29 chr1:174172800-174191000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:174173000-174173400 Enhancers K562 blood
31 chr1:174173000-174174600 Enhancers Primary T cells fromperipheralblood blood
32 chr1:174173000-174176400 Enhancers Primary T helper cells PMA-I stimulated --
33 chr1:174173200-174174000 Enhancers Pancreas Pancrea
34 chr1:174173200-174175200 Enhancers HepG2 liver
35 chr1:174173200-174191400 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015