The 2.0 version of rSNPBase

Variant report

Variant rs61828587
Chromosome Location chr1:174214174-174214175
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174176000-174222400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:174176800-174222400 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:174186600-174216600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:174186800-174217000 Weak transcription Brain Angular Gyrus brain
5 chr1:174186800-174232000 Weak transcription HSMMtube muscle
6 chr1:174187000-174217000 Weak transcription Pancreas Pancrea
7 chr1:174189000-174232000 Weak transcription HSMM muscle
8 chr1:174189200-174216800 Weak transcription Small Intestine intestine
9 chr1:174189600-174215400 Weak transcription NH-A brain
10 chr1:174191000-174215600 Weak transcription Fetal Brain Male brain
11 chr1:174191400-174215400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:174191400-174232000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:174191600-174232200 Weak transcription Brain Substantia Nigra brain
14 chr1:174191800-174215600 Weak transcription Brain Anterior Caudate brain
15 chr1:174192000-174215200 Weak transcription HMEC breast
16 chr1:174192000-174219400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr1:174192400-174224600 Weak transcription Fetal Thymus thymus
18 chr1:174200600-174216000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:174200800-174249200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr1:174201000-174217600 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr1:174201000-174221800 Weak transcription Fetal Muscle Trunk muscle
22 chr1:174201000-174249800 Weak transcription Primary hematopoietic stem cells blood
23 chr1:174201200-174218200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:174201200-174221400 Weak transcription NHDF-Ad bronchial
25 chr1:174202400-174214800 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:174202400-174221400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:174202400-174224800 Weak transcription Fetal Intestine Large intestine
28 chr1:174202400-174225400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:174202400-174229400 Weak transcription Fetal Lung lung
30 chr1:174202400-174232200 Weak transcription Right Ventricle heart
31 chr1:174202400-174256800 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr1:174208400-174215600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:174208400-174216800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:174208400-174216800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr1:174208400-174219800 Weak transcription Esophagus oesophagus
36 chr1:174208600-174249200 Weak transcription Placenta Placenta
37 chr1:174208800-174221800 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr1:174208800-174222200 Weak transcription NHEK skin
39 chr1:174209000-174215400 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr1:174209000-174216200 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr1:174209000-174216600 Strong transcription GM12878-XiMat blood
42 chr1:174209200-174215600 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr1:174209400-174215400 Strong transcription Primary T cells fromperipheralblood blood
44 chr1:174209600-174223200 Weak transcription A549 lung
45 chr1:174209800-174215800 Strong transcription Primary B cells from peripheral blood blood
46 chr1:174209800-174221400 Weak transcription Rectal Smooth Muscle rectum
47 chr1:174210000-174214400 Strong transcription Primary T cells from cord blood blood
48 chr1:174210600-174214200 Strong transcription Primary monocytes fromperipheralblood blood
49 chr1:174210600-174214400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:174210600-174214600 Strong transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015