Variant report

Variant rs61826824
Chromosome Location chr1:173992535-173992536
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173991600-173992800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr1:173991600-173993200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr1:173991800-173992600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
4 chr1:173991800-173992600 Flanking Active TSS Dnd41 blood
5 chr1:173991800-173992800 Flanking Active TSS Primary hematopoietic stem cells blood
6 chr1:173991800-173992800 Flanking Active TSS Stomach Smooth Muscle stomach
7 chr1:173991800-173993000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
8 chr1:173991800-173993000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
9 chr1:173991800-173993000 Enhancers Placenta Amnion Placenta Amnion
10 chr1:173991800-173993000 Flanking Active TSS Rectal Smooth Muscle rectum
11 chr1:173992000-173992600 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:173992000-173992600 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:173992000-173992600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:173992000-173992600 Flanking Active TSS Duodenum Mucosa Duodenum
15 chr1:173992000-173992800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:173992000-173992800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:173992000-173992800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
18 chr1:173992000-173992800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
19 chr1:173992000-173992800 Flanking Active TSS Primary B cells from cord blood blood
20 chr1:173992000-173992800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
21 chr1:173992000-173992800 Flanking Active TSS Brain Cingulate Gyrus brain
22 chr1:173992000-173992800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
23 chr1:173992000-173992800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
24 chr1:173992000-173992800 Enhancers Small Intestine intestine
25 chr1:173992000-173993000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:173992000-173993000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
27 chr1:173992000-173993000 Flanking Active TSS Colon Smooth Muscle Colon
28 chr1:173992000-173993000 Flanking Active TSS K562 blood
29 chr1:173992000-173993200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
30 chr1:173992200-173992600 Flanking Active TSS H1 Cell Line embryonic stem cell
31 chr1:173992200-173992600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:173992200-173992600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
33 chr1:173992200-173992600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
34 chr1:173992200-173992600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr1:173992200-173992600 Flanking Active TSS Brain Substantia Nigra brain
36 chr1:173992200-173992600 Flanking Active TSS Fetal Brain Female brain
37 chr1:173992200-173992600 Weak transcription Left Ventricle heart
38 chr1:173992200-173992600 Enhancers Right Ventricle heart
39 chr1:173992200-173992600 Enhancers NHDF-Ad bronchial
40 chr1:173992200-173992800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:173992200-173992800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
42 chr1:173992200-173992800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr1:173992200-173992800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr1:173992200-173992800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:173992200-173992800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:173992200-173992800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:173992200-173992800 Enhancers Primary mononuclear cells fromperipheralblood Blood
48 chr1:173992200-173992800 Enhancers Fetal Adrenal Gland Adrenal Gland
49 chr1:173992200-173992800 Flanking Active TSS Pancreatic Islets Pancreatic Islet
50 chr1:173992200-173992800 Enhancers Sigmoid Colon Sigmoid Colon

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