Variant report

Variant rs4652298
Chromosome Location chr1:173858524-173858525
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173838200-173866000 Weak transcription Small Intestine intestine
2 chr1:173838400-173860200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:173839000-173862800 Weak transcription HMEC breast
4 chr1:173841000-173864400 Weak transcription Fetal Heart heart
5 chr1:173841000-173868600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:173842800-173859200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:173853400-173865200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:173853800-173858600 Strong transcription Placenta Placenta
9 chr1:173854000-173858800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:173854000-173858800 Strong transcription Primary monocytes fromperipheralblood blood
11 chr1:173854000-173859400 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr1:173854200-173858800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:173854600-173858600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:173854800-173858600 Strong transcription Liver Liver
15 chr1:173855000-173858800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:173855400-173863000 Weak transcription NHEK skin
17 chr1:173855400-173868000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:173855600-173866800 Weak transcription Pancreas Pancrea
19 chr1:173855600-173875400 Weak transcription NH-A brain
20 chr1:173855800-173858600 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr1:173855800-173858800 Weak transcription A549 lung
22 chr1:173855800-173859400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:173855800-173860200 Weak transcription Spleen Spleen
24 chr1:173855800-173863400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:173855800-173873000 Weak transcription Fetal Intestine Small intestine
26 chr1:173855800-173880400 Weak transcription Thymus Thymus
27 chr1:173856000-173858800 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr1:173856000-173859200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:173856000-173861600 Weak transcription Gastric stomach
30 chr1:173856000-173862400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:173856000-173864200 Weak transcription Fetal Stomach stomach
32 chr1:173856000-173864400 Weak transcription Duodenum Mucosa Duodenum
33 chr1:173856000-173865400 Weak transcription Esophagus oesophagus
34 chr1:173856000-173868400 Weak transcription Hela-S3 cervix
35 chr1:173856000-173868600 Weak transcription Brain Angular Gyrus brain
36 chr1:173856000-173869400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr1:173856000-173869800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:173856000-173872600 Weak transcription Fetal Thymus thymus
39 chr1:173856000-173883000 Weak transcription Right Ventricle heart
40 chr1:173856200-173858800 Enhancers Primary neutrophils fromperipheralblood blood
41 chr1:173856200-173860000 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr1:173856200-173860400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:173856200-173861000 Weak transcription Colon Smooth Muscle Colon
44 chr1:173856200-173862000 Weak transcription Aorta Aorta
45 chr1:173856200-173862200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr1:173856200-173862600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:173856200-173862800 Weak transcription K562 blood
48 chr1:173856200-173863400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr1:173856200-173863600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
50 chr1:173856200-173863600 Weak transcription Placenta Amnion Placenta Amnion

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