Variant report

Variant rs9425761
Chromosome Location chr1:173839435-173839436
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173838000-173840800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr1:173838200-173839800 Weak transcription Lung lung
3 chr1:173838200-173846600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:173838200-173854200 Weak transcription Gastric stomach
5 chr1:173838200-173866000 Weak transcription Small Intestine intestine
6 chr1:173838400-173839600 Enhancers Primary T helper naive cells from peripheral blood blood
7 chr1:173838400-173839600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr1:173838400-173839600 Enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr1:173838400-173839600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:173838400-173839600 Enhancers Fetal Adrenal Gland Adrenal Gland
11 chr1:173838400-173839600 Weak transcription Psoas Muscle Psoas
12 chr1:173838400-173839600 Weak transcription Stomach Smooth Muscle stomach
13 chr1:173838400-173839800 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr1:173838400-173839800 Enhancers Brain Anterior Caudate brain
15 chr1:173838400-173839800 Weak transcription Fetal Brain Male brain
16 chr1:173838400-173839800 Flanking Active TSS GM12878-XiMat blood
17 chr1:173838400-173841000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr1:173838400-173844600 Weak transcription Ovary ovary
19 chr1:173838400-173844800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr1:173838400-173854200 Weak transcription Esophagus oesophagus
21 chr1:173838400-173854800 Weak transcription Aorta Aorta
22 chr1:173838400-173854800 Weak transcription Right Ventricle heart
23 chr1:173838400-173860200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr1:173838600-173839600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:173838600-173839600 Enhancers Primary T helper cells fromperipheralblood blood
26 chr1:173838600-173839600 Weak transcription Osteobl bone
27 chr1:173838600-173839800 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr1:173838600-173841000 Enhancers Stomach Mucosa stomach
29 chr1:173838600-173854800 Weak transcription Rectal Smooth Muscle rectum
30 chr1:173838800-173839600 Weak transcription Primary T cells from cord blood blood
31 chr1:173838800-173839600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:173838800-173839600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:173838800-173839600 Weak transcription Brain Germinal Matrix brain
34 chr1:173838800-173839600 Enhancers Hela-S3 cervix
35 chr1:173838800-173839600 Weak transcription NH-A brain
36 chr1:173838800-173839800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr1:173838800-173839800 Weak transcription Primary monocytes fromperipheralblood blood
38 chr1:173838800-173839800 Enhancers Primary hematopoietic stem cells blood
39 chr1:173838800-173839800 Enhancers Rectal Mucosa Donor 31 rectum
40 chr1:173838800-173839800 Weak transcription HSMM muscle
41 chr1:173838800-173839800 Weak transcription NHDF-Ad bronchial
42 chr1:173838800-173840000 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr1:173838800-173840200 Enhancers Colonic Mucosa Colon
44 chr1:173838800-173840200 Weak transcription Fetal Heart heart
45 chr1:173838800-173840600 Weak transcription Fetal Kidney kidney
46 chr1:173838800-173841000 Enhancers Pancreatic Islets Pancreatic Islet
47 chr1:173838800-173843600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:173838800-173844400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr1:173838800-173855800 Weak transcription Placenta Amnion Placenta Amnion
50 chr1:173839000-173839600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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