The 2.0 version of rSNPBase

Variant report

Variant rs6698348
Chromosome Location chr1:173821782-173821783
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173794400-173832800 Weak transcription Fetal Heart heart
2 chr1:173794600-173821800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:173794600-173821800 Weak transcription Pancreas Pancrea
4 chr1:173794600-173822000 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:173794600-173832000 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr1:173794600-173832000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:173794600-173832600 Weak transcription Brain Substantia Nigra brain
8 chr1:173794600-173833800 Weak transcription Stomach Mucosa stomach
9 chr1:173794800-173834000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:173795000-173826200 Weak transcription Psoas Muscle Psoas
11 chr1:173795000-173834600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:173795200-173822400 Weak transcription Rectal Smooth Muscle rectum
13 chr1:173795200-173824600 Weak transcription Gastric stomach
14 chr1:173797200-173828400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:173799600-173828800 Strong transcription Primary monocytes fromperipheralblood blood
16 chr1:173801000-173822200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr1:173801200-173825000 Weak transcription Brain Angular Gyrus brain
18 chr1:173803000-173826600 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr1:173806800-173822800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr1:173809000-173822000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:173809200-173825200 Weak transcription NHDF-Ad bronchial
22 chr1:173809800-173831800 Weak transcription Colonic Mucosa Colon
23 chr1:173810200-173822000 Weak transcription Fetal Kidney kidney
24 chr1:173811000-173824600 Weak transcription Colon Smooth Muscle Colon
25 chr1:173811000-173825000 Weak transcription Placenta Amnion Placenta Amnion
26 chr1:173811200-173822200 Weak transcription Brain Cingulate Gyrus brain
27 chr1:173811200-173825000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:173811200-173829200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr1:173813000-173822000 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr1:173813200-173822000 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr1:173813200-173822000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:173813200-173822000 Weak transcription HSMMtube muscle
33 chr1:173813200-173823000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr1:173813200-173824800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr1:173813200-173831800 Weak transcription Right Ventricle heart
36 chr1:173813200-173832000 Weak transcription Small Intestine intestine
37 chr1:173813400-173822000 Weak transcription Primary B cells from cord blood blood
38 chr1:173813400-173822000 Weak transcription NH-A brain
39 chr1:173813400-173831000 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr1:173813600-173821800 Weak transcription HUVEC blood vessel
41 chr1:173813600-173822000 Weak transcription Fetal Lung lung
42 chr1:173813600-173822200 Weak transcription Stomach Smooth Muscle stomach
43 chr1:173813600-173825400 Weak transcription Brain Anterior Caudate brain
44 chr1:173814600-173826400 Weak transcription Hela-S3 cervix
45 chr1:173814800-173822000 Weak transcription A549 lung
46 chr1:173815000-173826000 Weak transcription Esophagus oesophagus
47 chr1:173815400-173821800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:173815600-173822000 Weak transcription HepG2 liver
49 chr1:173815600-173822200 Weak transcription Thymus Thymus
50 chr1:173815600-173822400 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015