The 2.0 version of rSNPBase

Variant report

Variant rs1322772
Chromosome Location chr1:173835758-173835759
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173830800-173835800 Strong transcription Placenta Placenta
2 chr1:173831000-173836000 Strong transcription Left Ventricle heart
3 chr1:173831800-173837000 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
4 chr1:173832200-173837000 Transcr. at gene 5' and 3' K562 blood
5 chr1:173832400-173836000 Weak transcription Aorta Aorta
6 chr1:173832400-173836600 Transcr. at gene 5' and 3' GM12878-XiMat blood
7 chr1:173832400-173837000 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
8 chr1:173832600-173835800 Weak transcription Gastric stomach
9 chr1:173832600-173836400 Transcr. at gene 5' and 3' NH-A brain
10 chr1:173832800-173835800 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
11 chr1:173832800-173836400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:173832800-173836600 Transcr. at gene 5' and 3' iPS-18 Cell Line embryonic stem cell
13 chr1:173832800-173837000 Transcr. at gene 5' and 3' A549 lung
14 chr1:173833000-173836200 Transcr. at gene 5' and 3' HUVEC blood vessel
15 chr1:173833000-173836400 Transcr. at gene 5' and 3' NHLF lung
16 chr1:173833000-173836600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:173833000-173836600 Transcr. at gene 5' and 3' Osteobl bone
18 chr1:173833000-173836800 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:173833200-173836000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:173833200-173836200 Transcr. at gene 5' and 3' HMEC breast
21 chr1:173833200-173836400 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
22 chr1:173833200-173836800 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
23 chr1:173833200-173837000 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
24 chr1:173833400-173836200 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:173833400-173836200 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
26 chr1:173833400-173836200 Transcr. at gene 5' and 3' Hela-S3 cervix
27 chr1:173833400-173837000 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
28 chr1:173833600-173836600 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
29 chr1:173833600-173836800 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
30 chr1:173833600-173836800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:173833600-173837000 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr1:173833600-173837000 Transcr. at gene 5' and 3' iPS-15b Cell Line embryonic stem cell
33 chr1:173833800-173836000 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
34 chr1:173833800-173836000 Genic enhancers Primary T helper naive cells fromperipheralblood blood
35 chr1:173833800-173836000 Genic enhancers Primary T helper cells fromperipheralblood blood
36 chr1:173833800-173836200 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:173833800-173836200 Transcr. at gene 5' and 3' Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:173833800-173836400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
39 chr1:173833800-173836600 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:173833800-173836800 Transcr. at gene 5' and 3' Dnd41 blood
41 chr1:173833800-173837000 Transcr. at gene 5' and 3' NHEK skin
42 chr1:173833800-173838000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
43 chr1:173834000-173835800 Genic enhancers Primary T cells fromperipheralblood blood
44 chr1:173834000-173835800 Genic enhancers Liver Liver
45 chr1:173834000-173836000 Transcr. at gene 5' and 3' ES-UCSF4 Cell Line embryonic stem cell
46 chr1:173834000-173836000 Genic enhancers Primary B cells from peripheral blood blood
47 chr1:173834000-173836200 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
48 chr1:173834000-173836200 Transcr. at gene 5' and 3' Fetal Heart heart
49 chr1:173834000-173836200 Transcr. at gene 5' and 3' HSMM muscle
50 chr1:173834000-173836200 Transcr. at gene 5' and 3' NHDF-Ad bronchial

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015