The 2.0 version of rSNPBase

Variant report

Variant rs6695782
Chromosome Location chr1:173824384-173824385
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173794400-173832800 Weak transcription Fetal Heart heart
2 chr1:173794600-173832000 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:173794600-173832000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:173794600-173832600 Weak transcription Brain Substantia Nigra brain
5 chr1:173794600-173833800 Weak transcription Stomach Mucosa stomach
6 chr1:173794800-173834000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:173795000-173826200 Weak transcription Psoas Muscle Psoas
8 chr1:173795000-173834600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:173795200-173824600 Weak transcription Gastric stomach
10 chr1:173797200-173828400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:173799600-173828800 Strong transcription Primary monocytes fromperipheralblood blood
12 chr1:173801200-173825000 Weak transcription Brain Angular Gyrus brain
13 chr1:173803000-173826600 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:173809200-173825200 Weak transcription NHDF-Ad bronchial
15 chr1:173809800-173831800 Weak transcription Colonic Mucosa Colon
16 chr1:173811000-173824600 Weak transcription Colon Smooth Muscle Colon
17 chr1:173811000-173825000 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:173811200-173825000 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr1:173811200-173829200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:173813200-173824800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:173813200-173831800 Weak transcription Right Ventricle heart
22 chr1:173813200-173832000 Weak transcription Small Intestine intestine
23 chr1:173813400-173831000 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:173813600-173825400 Weak transcription Brain Anterior Caudate brain
25 chr1:173814600-173826400 Weak transcription Hela-S3 cervix
26 chr1:173815000-173826000 Weak transcription Esophagus oesophagus
27 chr1:173816000-173825000 Weak transcription Spleen Spleen
28 chr1:173818200-173831600 Weak transcription Fetal Brain Male brain
29 chr1:173818400-173829000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:173818400-173829800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:173818600-173825200 Strong transcription Fetal Stomach stomach
32 chr1:173818600-173829600 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr1:173818600-173830200 Strong transcription Primary T cells fromperipheralblood blood
34 chr1:173818600-173834800 Strong transcription Fetal Muscle Leg muscle
35 chr1:173818600-173834800 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr1:173818800-173827200 Strong transcription Primary T cells from cord blood blood
37 chr1:173818800-173827800 Strong transcription Dnd41 blood
38 chr1:173819200-173828200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:173819200-173833200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:173819200-173833800 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr1:173819200-173834000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:173819400-173827600 Strong transcription HMEC breast
43 chr1:173819400-173829800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:173819400-173832000 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr1:173819400-173834800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:173819600-173824600 Weak transcription Brain Hippocampus Middle brain
47 chr1:173819600-173830000 Weak transcription Right Atrium heart
48 chr1:173819600-173834000 Strong transcription Fetal Thymus thymus
49 chr1:173819600-173835600 Strong transcription Fetal Muscle Trunk muscle
50 chr1:173819800-173825600 Strong transcription Ovary ovary

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Last update: Aug 31, 2015