Variant report

Variant rs28578576
Chromosome Location chr1:173793106-173793107
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173789800-173795600 Active TSS GM12878-XiMat blood
2 chr1:173791800-173794600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr1:173791800-173794600 Active TSS NHLF lung
4 chr1:173791800-173795000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:173792000-173793200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
6 chr1:173792000-173795000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr1:173792200-173793200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:173792200-173793200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
9 chr1:173792200-173793200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:173792200-173793200 Flanking Active TSS Osteobl bone
11 chr1:173792200-173793400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:173792200-173793400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
13 chr1:173792200-173793600 Flanking Active TSS Primary B cells from cord blood blood
14 chr1:173792200-173795000 Active TSS ES-I3 Cell Line embryonic stem cell
15 chr1:173792200-173795000 Active TSS iPS-15b Cell Line embryonic stem cell
16 chr1:173792200-173795000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:173792200-173795000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:173792200-173795200 Active TSS HUES48 Cell Line embryonic stem cell
19 chr1:173792200-173795200 Active TSS iPS-20b Cell Line embryonic stem cell
20 chr1:173792200-173795400 Active TSS A549 lung
21 chr1:173792400-173793200 Flanking Active TSS Primary T cells from cord blood blood
22 chr1:173792400-173793200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
23 chr1:173792400-173793200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
24 chr1:173792400-173793200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
25 chr1:173792400-173793200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
26 chr1:173792400-173793200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
27 chr1:173792400-173793200 Flanking Active TSS Fetal Muscle Leg muscle
28 chr1:173792400-173793200 Flanking Active TSS Rectal Smooth Muscle rectum
29 chr1:173792400-173793400 Flanking Active TSS Primary hematopoietic stem cells blood
30 chr1:173792400-173793400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:173792400-173793400 Flanking Active TSS Duodenum Mucosa Duodenum
32 chr1:173792400-173794600 Active TSS ES-WA7 Cell Line embryonic stem cell
33 chr1:173792400-173794600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr1:173792400-173794600 Active TSS NHDF-Ad bronchial
35 chr1:173792400-173794800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:173792400-173794800 Active TSS Fetal Muscle Trunk muscle
37 chr1:173792400-173795000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
38 chr1:173792600-173793200 Flanking Active TSS Primary T cells fromperipheralblood blood
39 chr1:173792600-173793200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
40 chr1:173792600-173793200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
41 chr1:173792600-173793200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:173792600-173793200 Flanking Active TSS Brain Hippocampus Middle brain
43 chr1:173792600-173793200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
44 chr1:173792600-173793200 Flanking Active TSS Colonic Mucosa Colon
45 chr1:173792600-173793200 Flanking Active TSS Colon Smooth Muscle Colon
46 chr1:173792600-173793200 Flanking Active TSS Fetal Lung lung
47 chr1:173792600-173793400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
48 chr1:173792600-173793400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
49 chr1:173792600-173793400 Flanking Active TSS Adipose Nuclei Adipose
50 chr1:173792600-173793400 Flanking Active TSS Brain Angular Gyrus brain

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