The 2.0 version of rSNPBase

Variant report

Variant rs9425420
Chromosome Location chr1:173783232-173783233
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173736600-173792400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:173744800-173790200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr1:173745000-173792400 Weak transcription Psoas Muscle Psoas
4 chr1:173749200-173792600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:173751400-173792200 Weak transcription Fetal Kidney kidney
6 chr1:173752600-173790000 Weak transcription HepG2 liver
7 chr1:173753200-173792200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:173753200-173792800 Weak transcription Esophagus oesophagus
9 chr1:173753400-173787800 Weak transcription Right Ventricle heart
10 chr1:173753400-173792600 Weak transcription Spleen Spleen
11 chr1:173753400-173792800 Weak transcription Gastric stomach
12 chr1:173753400-173792800 Weak transcription Pancreas Pancrea
13 chr1:173753600-173787600 Weak transcription Placenta Amnion Placenta Amnion
14 chr1:173753600-173792600 Weak transcription Brain Cingulate Gyrus brain
15 chr1:173754200-173792200 Weak transcription Fetal Brain Female brain
16 chr1:173754400-173786000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:173754400-173792600 Weak transcription Brain Hippocampus Middle brain
18 chr1:173755200-173791600 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr1:173755400-173787400 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr1:173755400-173787400 Weak transcription Stomach Smooth Muscle stomach
21 chr1:173755400-173792200 Weak transcription HSMMtube muscle
22 chr1:173755400-173792600 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:173756800-173783400 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:173756800-173791800 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr1:173757400-173791800 Weak transcription Brain Germinal Matrix brain
26 chr1:173758800-173792200 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr1:173761000-173784200 Weak transcription Lung lung
28 chr1:173761000-173788000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:173761000-173792200 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:173770000-173792000 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr1:173772400-173787400 Weak transcription HMEC breast
32 chr1:173772600-173787400 Weak transcription Hela-S3 cervix
33 chr1:173772600-173792200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr1:173773400-173787400 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:173775400-173792400 Weak transcription Brain Anterior Caudate brain
36 chr1:173775600-173787400 Weak transcription Primary B cells from peripheral blood blood
37 chr1:173775600-173787600 Weak transcription NHLF lung
38 chr1:173775600-173791600 Weak transcription NH-A brain
39 chr1:173775600-173792200 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr1:173775600-173792200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:173775800-173791800 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr1:173775800-173792000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:173775800-173792800 Weak transcription Ovary ovary
44 chr1:173776000-173787600 Weak transcription Fetal Lung lung
45 chr1:173776000-173792400 Weak transcription H9 Cell Line embryonic stem cell
46 chr1:173776000-173792400 Weak transcription Fetal Intestine Large intestine
47 chr1:173776000-173792800 Weak transcription Left Ventricle heart
48 chr1:173776800-173790000 Weak transcription NHDF-Ad bronchial
49 chr1:173776800-173792200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:173777000-173786000 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015