The 2.0 version of rSNPBase

Variant report

Variant rs9425740
Chromosome Location chr1:173765583-173765584
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173729800-173781800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:173735800-173781000 Weak transcription Small Intestine intestine
3 chr1:173736600-173792400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:173744800-173790200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:173745000-173767400 Weak transcription NHEK skin
6 chr1:173745000-173792400 Weak transcription Psoas Muscle Psoas
7 chr1:173747800-173769200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:173749200-173792600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:173749800-173777800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:173751200-173773600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr1:173751400-173769000 Weak transcription Fetal Intestine Small intestine
12 chr1:173751400-173792200 Weak transcription Fetal Kidney kidney
13 chr1:173751800-173774600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr1:173752600-173790000 Weak transcription HepG2 liver
15 chr1:173752800-173771800 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr1:173752800-173777000 Weak transcription Brain Angular Gyrus brain
17 chr1:173753200-173774400 Weak transcription H9 Cell Line embryonic stem cell
18 chr1:173753200-173792200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:173753200-173792800 Weak transcription Esophagus oesophagus
20 chr1:173753400-173767200 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr1:173753400-173772200 Weak transcription Aorta Aorta
22 chr1:173753400-173774400 Weak transcription Ovary ovary
23 chr1:173753400-173775000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:173753400-173787800 Weak transcription Right Ventricle heart
25 chr1:173753400-173792600 Weak transcription Spleen Spleen
26 chr1:173753400-173792800 Weak transcription Gastric stomach
27 chr1:173753400-173792800 Weak transcription Pancreas Pancrea
28 chr1:173753600-173787600 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:173753600-173792600 Weak transcription Brain Cingulate Gyrus brain
30 chr1:173753800-173767800 Weak transcription A549 lung
31 chr1:173754000-173774400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:173754000-173774600 Weak transcription Brain Anterior Caudate brain
33 chr1:173754200-173792200 Weak transcription Fetal Brain Female brain
34 chr1:173754400-173774800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr1:173754400-173782200 Weak transcription Rectal Smooth Muscle rectum
36 chr1:173754400-173786000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr1:173754400-173792600 Weak transcription Brain Hippocampus Middle brain
38 chr1:173755000-173772200 Weak transcription Left Ventricle heart
39 chr1:173755200-173791600 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:173755400-173766000 Weak transcription HUVEC blood vessel
41 chr1:173755400-173766400 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr1:173755400-173767200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:173755400-173767800 Weak transcription NH-A brain
44 chr1:173755400-173769200 Weak transcription Primary B cells from cord blood blood
45 chr1:173755400-173772000 Weak transcription Primary B cells from peripheral blood blood
46 chr1:173755400-173772000 Weak transcription Duodenum Mucosa Duodenum
47 chr1:173755400-173772000 Weak transcription Fetal Lung lung
48 chr1:173755400-173772600 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr1:173755400-173774800 Weak transcription NHLF lung
50 chr1:173755400-173783200 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015