The 2.0 version of rSNPBase

Variant report

Variant rs7549291
Chromosome Location chr1:173970776-173970777
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173909800-173974200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:173915600-173977800 Weak transcription Stomach Mucosa stomach
3 chr1:173942200-173986200 Weak transcription Fetal Brain Male brain
4 chr1:173950600-173973400 Weak transcription Psoas Muscle Psoas
5 chr1:173953200-173974200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:173958600-173987200 Weak transcription Gastric stomach
7 chr1:173962000-173975000 Weak transcription Right Ventricle heart
8 chr1:173962000-173988400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:173962200-173972200 Weak transcription Spleen Spleen
10 chr1:173962200-173974000 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr1:173962200-173974000 Weak transcription HSMMtube muscle
12 chr1:173962200-173974200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:173962200-173974200 Weak transcription HMEC breast
14 chr1:173962200-173976600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:173962200-173976800 Weak transcription NH-A brain
16 chr1:173962200-173977200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:173962200-173978400 Weak transcription Colonic Mucosa Colon
18 chr1:173962200-173978600 Weak transcription Lung lung
19 chr1:173962200-173983200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:173962200-173984200 Weak transcription Primary T cells from cord blood blood
21 chr1:173962200-173989000 Weak transcription Fetal Kidney kidney
22 chr1:173962200-173989600 Weak transcription H1 Cell Line embryonic stem cell
23 chr1:173962200-173989600 Weak transcription Aorta Aorta
24 chr1:173962200-173989800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:173962200-173990400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:173962400-173974000 Weak transcription Osteobl bone
27 chr1:173962400-173974200 Weak transcription HSMM muscle
28 chr1:173962400-173974200 Weak transcription NHEK skin
29 chr1:173962400-173977400 Weak transcription Hela-S3 cervix
30 chr1:173962400-173987800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr1:173962600-173974600 Weak transcription Primary hematopoietic stem cells blood
32 chr1:173962600-173986000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:173962600-173988400 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr1:173962600-173988600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr1:173962600-173989400 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr1:173962800-173989800 Weak transcription Placenta Placenta
37 chr1:173963600-173974000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:173963800-173975000 Weak transcription Fetal Muscle Trunk muscle
39 chr1:173965000-173974200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:173965000-173989600 Weak transcription Fetal Thymus thymus
41 chr1:173965200-173986600 Weak transcription HUVEC blood vessel
42 chr1:173966000-173971400 Weak transcription Primary B cells from cord blood blood
43 chr1:173966200-173977600 Weak transcription Duodenum Mucosa Duodenum
44 chr1:173966200-173981000 Weak transcription Pancreas Pancrea
45 chr1:173966200-173986200 Weak transcription Fetal Brain Female brain
46 chr1:173966200-173989800 Weak transcription Fetal Muscle Leg muscle
47 chr1:173966400-173970800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr1:173966400-173971400 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr1:173966400-173974000 Weak transcription Primary B cells from peripheral blood blood
50 chr1:173966400-173974000 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015