The 2.0 version of rSNPBase

Variant report

Variant rs61828895
Chromosome Location chr1:173908538-173908539
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173882800-173912400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:173894600-173914400 Weak transcription Right Ventricle heart
3 chr1:173895200-173912200 Weak transcription Stomach Mucosa stomach
4 chr1:173896400-173910000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:173896400-173914400 Weak transcription Pancreas Pancrea
6 chr1:173898000-173915200 Weak transcription Aorta Aorta
7 chr1:173898200-173908800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:173898200-173910000 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:173898200-173910200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:173898200-173912200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:173898800-173912200 Weak transcription NHEK skin
12 chr1:173899200-173913800 Weak transcription Fetal Heart heart
13 chr1:173899400-173917400 Strong transcription Duodenum Smooth Muscle Duodenum
14 chr1:173899400-173927200 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr1:173899400-173929600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:173899600-173923200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:173899800-173953800 Strong transcription Primary T cells fromperipheralblood blood
18 chr1:173900000-173911000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:173900000-173929600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:173900000-173958600 Strong transcription Rectal Mucosa Donor 31 rectum
21 chr1:173900000-173962400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:173900000-173966600 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr1:173900000-173968200 Strong transcription Primary monocytes fromperipheralblood blood
24 chr1:173900200-173912400 Weak transcription Fetal Brain Male brain
25 chr1:173900200-173966400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:173900400-173964600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:173900800-173963800 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr1:173901200-173931400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:173901400-173962200 Strong transcription Duodenum Mucosa Duodenum
30 chr1:173901600-173912800 Strong transcription HSMM muscle
31 chr1:173901600-173966400 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr1:173901600-173966400 Strong transcription Dnd41 blood
33 chr1:173901800-173909000 Weak transcription NHLF lung
34 chr1:173902200-173921200 Weak transcription ES-WA7 Cell Line embryonic stem cell
35 chr1:173902200-173928200 Strong transcription Rectal Mucosa Donor 29 rectum
36 chr1:173902200-173954600 Strong transcription Primary B cells from peripheral blood blood
37 chr1:173902600-173954400 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr1:173903200-173925000 Strong transcription Fetal Muscle Trunk muscle
39 chr1:173903200-173925600 Strong transcription Primary T helper cells PMA-I stimulated --
40 chr1:173903400-173915600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:173903400-173917400 Strong transcription HUVEC blood vessel
42 chr1:173903400-173927000 Strong transcription Fetal Muscle Leg muscle
43 chr1:173903400-173927000 Strong transcription Fetal Thymus thymus
44 chr1:173903800-173912600 Weak transcription Brain Angular Gyrus brain
45 chr1:173904000-173929200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:173904000-173966400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:173904200-173912400 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr1:173904800-173909400 Strong transcription Fetal Lung lung
49 chr1:173904800-173910800 Strong transcription Primary T cells from cord blood blood
50 chr1:173904800-173921400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015