The 2.0 version of rSNPBase

Variant report

Variant rs61827904
Chromosome Location chr1:174133327-174133328
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174129600-174134000 Weak transcription Stomach Mucosa stomach
2 chr1:174129600-174164800 Weak transcription Gastric stomach
3 chr1:174129600-174173200 Weak transcription Pancreas Pancrea
4 chr1:174129800-174134800 Weak transcription Ovary ovary
5 chr1:174129800-174135000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:174129800-174135000 Weak transcription Stomach Smooth Muscle stomach
7 chr1:174129800-174135000 Weak transcription Spleen Spleen
8 chr1:174129800-174137000 Weak transcription Fetal Lung lung
9 chr1:174129800-174145600 Weak transcription Fetal Thymus thymus
10 chr1:174129800-174147000 Weak transcription Fetal Brain Male brain
11 chr1:174129800-174149600 Weak transcription Aorta Aorta
12 chr1:174130000-174133600 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:174130000-174134800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr1:174130000-174134800 Weak transcription Adipose Nuclei Adipose
15 chr1:174130000-174134800 Weak transcription Liver Liver
16 chr1:174130000-174134800 Weak transcription Brain Hippocampus Middle brain
17 chr1:174130000-174135400 Weak transcription Primary monocytes fromperipheralblood blood
18 chr1:174130000-174135400 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr1:174130000-174135800 Weak transcription Right Ventricle heart
20 chr1:174130000-174136200 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr1:174130000-174144400 Weak transcription Primary hematopoietic stem cells blood
22 chr1:174130000-174157600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:174130200-174133400 Weak transcription A549 lung
24 chr1:174130200-174135200 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr1:174130200-174135400 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr1:174130200-174138000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr1:174130200-174143200 Weak transcription Primary B cells from cord blood blood
28 chr1:174130200-174145000 Weak transcription NHEK skin
29 chr1:174130200-174145600 Weak transcription Fetal Stomach stomach
30 chr1:174130200-174147400 Weak transcription Hela-S3 cervix
31 chr1:174130800-174134800 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr1:174130800-174138200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:174130800-174156600 Weak transcription Primary T cells from cord blood blood
34 chr1:174131000-174135400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:174131200-174134600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr1:174131200-174135000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr1:174131200-174138800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:174131400-174136600 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr1:174131800-174133400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:174131800-174134000 Weak transcription Primary B cells from peripheral blood blood
41 chr1:174131800-174134200 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr1:174131800-174134600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:174131800-174134600 Weak transcription Left Ventricle heart
44 chr1:174131800-174135000 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:174131800-174135000 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr1:174131800-174135800 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr1:174132000-174134400 Weak transcription Primary T cells fromperipheralblood blood
48 chr1:174132200-174135200 Flanking Active TSS GM12878-XiMat blood
49 chr1:174132400-174133400 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr1:174132400-174134800 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015