The 2.0 version of rSNPBase

Variant report

Variant rs12093885
Chromosome Location chr1:173967402-173967403
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173900000-173968200 Strong transcription Primary monocytes fromperipheralblood blood
2 chr1:173909800-173974200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:173915600-173977800 Weak transcription Stomach Mucosa stomach
4 chr1:173931200-173969800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:173942200-173986200 Weak transcription Fetal Brain Male brain
6 chr1:173949200-173970600 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:173949600-173970600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:173950600-173973400 Weak transcription Psoas Muscle Psoas
9 chr1:173952800-173967600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:173953200-173974200 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr1:173958600-173987200 Weak transcription Gastric stomach
12 chr1:173960800-173970400 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:173962000-173967600 Weak transcription Brain Cingulate Gyrus brain
14 chr1:173962000-173975000 Weak transcription Right Ventricle heart
15 chr1:173962000-173988400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:173962200-173968000 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr1:173962200-173968600 Weak transcription Colon Smooth Muscle Colon
18 chr1:173962200-173969600 Weak transcription Brain Angular Gyrus brain
19 chr1:173962200-173969600 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:173962200-173970200 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr1:173962200-173970400 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:173962200-173970400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:173962200-173970400 Weak transcription Ovary ovary
24 chr1:173962200-173970600 Weak transcription Stomach Smooth Muscle stomach
25 chr1:173962200-173972200 Weak transcription Spleen Spleen
26 chr1:173962200-173974000 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr1:173962200-173974000 Weak transcription HSMMtube muscle
28 chr1:173962200-173974200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:173962200-173974200 Weak transcription HMEC breast
30 chr1:173962200-173976600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:173962200-173976800 Weak transcription NH-A brain
32 chr1:173962200-173977200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:173962200-173978400 Weak transcription Colonic Mucosa Colon
34 chr1:173962200-173978600 Weak transcription Lung lung
35 chr1:173962200-173983200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr1:173962200-173984200 Weak transcription Primary T cells from cord blood blood
37 chr1:173962200-173989000 Weak transcription Fetal Kidney kidney
38 chr1:173962200-173989600 Weak transcription H1 Cell Line embryonic stem cell
39 chr1:173962200-173989600 Weak transcription Aorta Aorta
40 chr1:173962200-173989800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:173962200-173990400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:173962400-173967600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:173962400-173968400 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr1:173962400-173974000 Weak transcription Osteobl bone
45 chr1:173962400-173974200 Weak transcription HSMM muscle
46 chr1:173962400-173974200 Weak transcription NHEK skin
47 chr1:173962400-173977400 Weak transcription Hela-S3 cervix
48 chr1:173962400-173987800 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr1:173962600-173970400 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr1:173962600-173974600 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015