The 2.0 version of rSNPBase

Variant report

Variant rs61897195
Chromosome Location chr11:3980199-3980200
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:3961200-4002000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr11:3968200-3980200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr11:3969000-3980400 Weak transcription NHLF lung
4 chr11:3970800-3988600 Weak transcription Primary monocytes fromperipheralblood blood
5 chr11:3971400-3988400 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr11:3972800-3988800 Weak transcription Fetal Muscle Leg muscle
7 chr11:3973000-3988600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr11:3973200-3981000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr11:3973200-3982400 Weak transcription Primary B cells from cord blood blood
10 chr11:3973200-3984800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr11:3973200-3993200 Weak transcription Colon Smooth Muscle Colon
12 chr11:3973200-4008400 Weak transcription Fetal Lung lung
13 chr11:3973600-3993800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr11:3974200-3982200 Weak transcription Brain Anterior Caudate brain
15 chr11:3974400-3980400 Weak transcription Rectal Smooth Muscle rectum
16 chr11:3974400-3983400 Weak transcription Small Intestine intestine
17 chr11:3974800-3988200 Weak transcription Primary hematopoietic stem cells blood
18 chr11:3974800-3988800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr11:3975000-4006000 Weak transcription Right Ventricle heart
20 chr11:3975600-3988600 Weak transcription Dnd41 blood
21 chr11:3975600-3988800 Weak transcription Aorta Aorta
22 chr11:3975800-3984800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr11:3975800-3988800 Weak transcription Esophagus oesophagus
24 chr11:3976000-3980400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr11:3976200-3980200 Weak transcription Placenta Amnion Placenta Amnion
26 chr11:3976200-3980200 Enhancers K562 blood
27 chr11:3977200-3982200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr11:3977400-3980200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr11:3977400-3983000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr11:3977400-3985400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr11:3977400-3988600 Weak transcription Primary B cells from peripheral blood blood
32 chr11:3977600-3980400 Weak transcription Fetal Thymus thymus
33 chr11:3977600-3980600 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr11:3977800-3980200 Weak transcription GM12878-XiMat blood
35 chr11:3977800-3980600 Weak transcription Primary T cells from cord blood blood
36 chr11:3977800-3981400 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr11:3977800-3982200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr11:3978400-3980200 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr11:3978600-3980400 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr11:3979000-3981200 Enhancers Placenta Placenta
41 chr11:3979200-3980200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr11:3979400-3980400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr11:3979400-3980400 Enhancers HepG2 liver
44 chr11:3979400-3981000 Enhancers Primary T cells fromperipheralblood blood
45 chr11:3979400-3981800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr11:3979400-3982000 Enhancers NHEK skin
47 chr11:3979400-3982600 Enhancers Primary T helper cells fromperipheralblood blood
48 chr11:3979400-3982600 Enhancers Skeletal Muscle Female skeletal muscle
49 chr11:3979400-3983400 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr11:3979600-3980400 Enhancers A549 lung

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Last update: Aug 31, 2015