The 2.0 version of rSNPBase

Variant report

Variant rs11030286
Chromosome Location chr11:3949527-3949528
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:3924000-3950600 Weak transcription Rectal Smooth Muscle rectum
2 chr11:3929400-3950600 Weak transcription Ovary ovary
3 chr11:3934800-3951000 Weak transcription Gastric stomach
4 chr11:3937800-3950600 Weak transcription Lung lung
5 chr11:3938400-3956400 Weak transcription Dnd41 blood
6 chr11:3938600-3949800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr11:3939000-3950200 Weak transcription Left Ventricle heart
8 chr11:3939000-3950200 Weak transcription Pancreas Pancrea
9 chr11:3939000-3956000 Weak transcription Esophagus oesophagus
10 chr11:3939600-3950000 Weak transcription Colon Smooth Muscle Colon
11 chr11:3939600-3950200 Weak transcription Fetal Thymus thymus
12 chr11:3941600-3950600 Weak transcription Stomach Mucosa stomach
13 chr11:3941600-3951000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr11:3942000-3950200 Weak transcription Stomach Smooth Muscle stomach
15 chr11:3942000-3950400 Weak transcription K562 blood
16 chr11:3942000-3950800 Weak transcription Small Intestine intestine
17 chr11:3942200-3951000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr11:3943200-3949800 Weak transcription Primary T cells fromperipheralblood blood
19 chr11:3943200-3950400 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr11:3943400-3949800 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr11:3943400-3954800 Weak transcription Primary hematopoietic stem cells blood
22 chr11:3943800-3953200 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr11:3944000-3950400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr11:3944000-3950800 Weak transcription Primary monocytes fromperipheralblood blood
25 chr11:3947200-3952200 Enhancers Liver Liver
26 chr11:3947600-3950000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr11:3947800-3949600 Enhancers Primary neutrophils fromperipheralblood blood
28 chr11:3947800-3950200 Enhancers Primary B cells from peripheral blood blood
29 chr11:3947800-3950800 Weak transcription HSMM muscle
30 chr11:3948000-3949800 Enhancers Primary B cells from cord blood blood
31 chr11:3948000-3950400 Enhancers Skeletal Muscle Female skeletal muscle
32 chr11:3948000-3951400 Enhancers Fetal Stomach stomach
33 chr11:3948000-3952200 Enhancers Fetal Muscle Leg muscle
34 chr11:3948200-3955800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr11:3948200-3955800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr11:3948400-3950600 Weak transcription Fetal Kidney kidney
37 chr11:3948400-3951200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr11:3948400-3952800 Weak transcription Placenta Amnion Placenta Amnion
39 chr11:3948400-3960400 Weak transcription NHEK skin
40 chr11:3948600-3949800 Weak transcription Fetal Heart heart
41 chr11:3948600-3955600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr11:3948800-3950800 Weak transcription HSMMtube muscle
43 chr11:3948800-3951200 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr11:3948800-3951400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr11:3948800-3954400 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr11:3948800-3960800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr11:3949000-3949600 Weak transcription Primary T cells from cord blood blood
48 chr11:3949000-3950000 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr11:3949000-3950200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr11:3949000-3950200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015