Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:57659417..57661558-chr5:57689608..57691662,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs12652282	1.00[EUR][1000 genomes]
rs12652773	1.00[EUR][1000 genomes]
rs12654923	1.00[EUR][1000 genomes]
rs12657414	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2033227	1.00[EUR][1000 genomes]
rs2047751	0.81[ASN][1000 genomes]
rs4699921	1.00[EUR][1000 genomes]
rs62366315	1.00[EUR][1000 genomes]
rs62366336	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62366338	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62366339	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62366340	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62366341	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62366342	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62366343	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62366344	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62366346	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62368200	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62368201	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62368202	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62368204	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9292160	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv4842	chr5:57653257-57694850	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv508358	chr5:57673230-57709684	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv1032746	chr5:57675471-57701548	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv989305	chr5:57678008-57695255	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57689600-57690400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr5:57689600-57690600	Enhancers	NHEK	skin
3	chr5:57690000-57690400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr5:57690000-57690600	Weak transcription	Aorta	Aorta
5	chr5:57690200-57690400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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