Variant report

Variant	rs62416415
Chromosome Location	chr6:54964363-54964364
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs12055817	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4518485	0.95[ASN][1000 genomes]
rs62416361	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62416376	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62416457	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62416542	0.88[EUR][1000 genomes]
rs6937662	0.95[ASN][1000 genomes]
rs9357824	0.88[EUR][1000 genomes]
rs9357828	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9357833	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9357834	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9367603	0.83[EUR][1000 genomes]
rs9367613	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9370356	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9370368	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9370372	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9370376	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9370383	0.90[ASN][1000 genomes]
rs9382410	0.83[EUR][1000 genomes]
rs9382412	0.83[EUR][1000 genomes]
rs9382413	0.88[EUR][1000 genomes]
rs9382433	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9382435	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9382439	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9382451	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9382453	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9396026	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9396027	0.83[ASN][1000 genomes]
rs9396031	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9396037	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9396048	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9396049	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9637955	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54963600-54965200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr6:54964200-54964600	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr6:54964200-54964800	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr6:54964200-54965000	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr6:54964200-54965400	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr6:54964200-54965800	Enhancers	HUES48 Cell Line	embryonic stem cell

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