Variant report

Variant	rs627418
Chromosome Location	chr11:108131225-108131226
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 164 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:157)

rs_ID	r²[population]
rs1003623	0.92[EUR][1000 genomes]
rs1003624	1.00[CEU][hapmap];0.81[CHB][hapmap];0.92[EUR][1000 genomes]
rs10431061	0.91[CHB][hapmap];0.98[CHD][hapmap];0.86[JPT][hapmap]
rs10789659	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.84[YRI][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10890834	0.96[CEU][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.83[MEX][hapmap];0.97[TSI][hapmap]
rs11212538	0.91[CEU][hapmap];0.85[CHB][hapmap];0.86[EUR][1000 genomes]
rs11212542	0.82[EUR][1000 genomes]
rs11212543	0.86[EUR][1000 genomes]
rs11212546	1.00[CEU][hapmap];0.85[CHB][hapmap];0.88[EUR][1000 genomes]
rs11212551	0.96[CEU][hapmap];0.91[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11212579	0.96[EUR][1000 genomes]
rs11212617	1.00[CEU][hapmap];0.81[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap]
rs113995	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap]
rs1150203	0.92[EUR][1000 genomes]
rs11605442	1.00[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12272183	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12787445	0.92[CEU][hapmap];0.95[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.87[MEX][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes]
rs1583598	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.88[LWK][hapmap];0.91[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap]
rs1607476	1.00[CEU][hapmap];0.95[CHB][hapmap];0.80[YRI][hapmap];0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs170548	0.81[JPT][hapmap]
rs172894	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[GIH][hapmap];0.90[LWK][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];0.91[YRI][hapmap]
rs172896	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap]
rs172927	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs179110	0.81[JPT][hapmap]
rs183459	1.00[CEU][hapmap];0.95[CHB][hapmap];0.82[JPT][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs183460	1.00[CEU][hapmap];0.91[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1850730	0.92[CEU][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes]
rs186593	0.82[CHB][hapmap];0.90[JPT][hapmap]
rs186595	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap]
rs189037	0.89[EUR][1000 genomes]
rs1893812	0.84[EUR][1000 genomes]
rs1893813	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2056267	0.95[CEU][hapmap];0.94[CHB][hapmap];0.80[JPT][hapmap];0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2070661	0.81[ASW][hapmap];0.92[CEU][hapmap];0.81[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2083707	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.88[LWK][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.81[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs227040	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes]
rs227041	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes]
rs227053	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs227054	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs227055	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.84[YRI][hapmap]
rs227058	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap]
rs227060	0.81[JPT][hapmap]
rs227061	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes]
rs227062	1.00[CEU][hapmap];0.90[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.94[TSI][hapmap];0.83[EUR][1000 genomes]
rs227063	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs227064	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.80[LWK][hapmap];0.91[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.84[YRI][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs227066	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs227067	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs227068	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes]
rs227069	0.91[CHB][hapmap];0.87[CHD][hapmap];0.81[JPT][hapmap]
rs227070	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.93[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs227072	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes]
rs227073	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes]
rs227074	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes]
rs227075	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];0.91[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs227076	0.83[EUR][1000 genomes]
rs227077	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap]
rs227087	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap]
rs227092	0.92[CEU][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];0.95[GIH][hapmap];0.91[JPT][hapmap];0.90[TSI][hapmap]
rs228588	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs228589	1.00[CEU][hapmap];0.91[CHB][hapmap];0.82[JPT][hapmap];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs228590	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs228591	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.94[TSI][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs228592	1.00[CEU][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs228594	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs228596	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs228597	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs228598	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs228599	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs228601	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs228606	0.86[CHB][hapmap]
rs228607	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs228608	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2356801	1.00[CEU][hapmap];0.81[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap]
rs373759	0.81[JPT][hapmap]
rs374443	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[YRI][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3781868	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];0.96[MEX][hapmap];0.94[TSI][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3781869	0.88[EUR][1000 genomes]
rs4027718	0.86[EUR][1000 genomes]
rs419716	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes]
rs425061	0.81[EUR][1000 genomes]
rs425538	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];0.91[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4585	0.92[CEU][hapmap];0.86[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.95[TSI][hapmap]
rs4623864	0.92[CEU][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes]
rs4753833	1.00[CEU][hapmap];0.85[CHB][hapmap];0.88[EUR][1000 genomes]
rs4754299	0.83[EUR][1000 genomes]
rs4754301	0.86[EUR][1000 genomes]
rs4754305	1.00[CEU][hapmap];0.91[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.88[EUR][1000 genomes]
rs4754324	1.00[CEU][hapmap];0.81[AFR][1000 genomes]
rs4987982	1.00[CEU][hapmap];0.86[CHB][hapmap];0.88[YRI][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs5023001	0.81[AFR][1000 genomes]
rs573890	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.86[JPT][hapmap];0.94[TSI][hapmap]
rs582157	0.89[EUR][1000 genomes]
rs583725	0.92[EUR][1000 genomes]
rs592955	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[EUR][1000 genomes]
rs594153	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs595747	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs597788	0.81[JPT][hapmap]
rs599164	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs599406	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs599558	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs600329	0.92[EUR][1000 genomes]
rs600691	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs600931	1.00[CEU][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs601111	0.92[EUR][1000 genomes]
rs605394	0.82[EUR][1000 genomes]
rs606275	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs608086	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs609261	1.00[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];1.00[GIH][hapmap];0.95[TSI][hapmap];0.92[EUR][1000 genomes]
rs609429	0.85[EUR][1000 genomes]
rs609557	0.96[CEU][hapmap];0.91[CHB][hapmap];0.93[CHD][hapmap];0.97[GIH][hapmap];0.82[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs609655	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs611646	0.91[CHB][hapmap];0.85[JPT][hapmap]
rs618499	1.00[CEU][hapmap];0.86[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs619972	1.00[CEU][hapmap];0.95[TSI][hapmap];0.92[EUR][1000 genomes]
rs620613	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs621947	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs623860	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs624366	1.00[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];1.00[GIH][hapmap];0.92[EUR][1000 genomes]
rs624852	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs624888	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs625120	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs634268	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs637064	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs641312	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs641605	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs642496	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs645485	1.00[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];1.00[GIH][hapmap];0.95[TSI][hapmap];0.92[EUR][1000 genomes]
rs647681	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs650128	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs650173	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs652311	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap]
rs652541	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs654005	1.00[CEU][hapmap];0.82[CHB][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6589007	0.96[CEU][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes]
rs6589008	0.81[EUR][1000 genomes]
rs6589019	1.00[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];0.96[YRI][hapmap]
rs660429	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs661467	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs662218	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.88[EUR][1000 genomes]
rs662578	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.85[EUR][1000 genomes]
rs664143	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.88[LWK][hapmap];0.91[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs664677	1.00[CEU][hapmap];0.86[CHB][hapmap];0.89[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs664982	0.83[EUR][1000 genomes]
rs672655	1.00[CEU][hapmap];0.91[CHB][hapmap];0.87[CHD][hapmap];0.81[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs672964	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs673281	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs676729	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs679782	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs694376	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.87[YRI][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs694799	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7118967	0.81[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7395528	0.88[EUR][1000 genomes]
rs7931930	1.00[CEU][hapmap];0.86[CHB][hapmap];0.87[CHD][hapmap];0.81[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap]
rs7942014	1.00[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];0.83[YRI][hapmap]
rs7948117	0.82[EUR][1000 genomes]
rs9667658	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898383	chr11:108068954-108251211	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	24 gene(s)	inside rSNPs	diseases
2	nsv556430	chr11:108097333-108175462	Genic enhancers Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
3	nsv898384	chr11:108097333-108251211	Weak transcription Genic enhancers ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases
4	nsv1052254	chr11:108122683-108845008	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
5	nsv541164	chr11:108122683-108845008	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
6	nsv898385	chr11:108123189-108165736	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
7	nsv832262	chr11:108123831-108309350	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs627418	C11orf65	cis	parietal	SCAN
rs627418	C11orf53	cis	parietal	SCAN
rs627418	NPAT	cis	cerebellum	SCAN
rs627418	ACAT1	Cis_1M	lymphoblastoid	RTeQTL
rs627418	ACAT1	cis	parietal	SCAN
rs627418	ACAT1	cis	cerebellum	SCAN

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:108094800-108147400	Weak transcription	Esophagus	oesophagus
2	chr11:108094800-108244400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:108096000-108148600	Weak transcription	Fetal Heart	heart
4	chr11:108096400-108156400	Weak transcription	NHLF	lung
5	chr11:108098400-108131600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr11:108099800-108139000	Weak transcription	Hela-S3	cervix
7	chr11:108104200-108147400	Weak transcription	Gastric	stomach
8	chr11:108104600-108144000	Weak transcription	Lung	lung
9	chr11:108108200-108144200	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr11:108108400-108184800	Weak transcription	NHEK	skin
11	chr11:108108800-108147600	Weak transcription	Psoas Muscle	Psoas
12	chr11:108112800-108131400	Strong transcription	Primary B cells from cord blood	blood
13	chr11:108113600-108131800	Strong transcription	Dnd41	blood
14	chr11:108113800-108147200	Weak transcription	Aorta	Aorta
15	chr11:108114800-108131800	Strong transcription	HUES6 Cell Line	embryonic stem cell
16	chr11:108115000-108132800	Strong transcription	Primary B cells from peripheral blood	blood
17	chr11:108117000-108131400	Strong transcription	Liver	Liver
18	chr11:108117000-108131400	Strong transcription	Monocytes-CD14+_RO01746	blood
19	chr11:108117400-108131400	Strong transcription	Duodenum Mucosa	Duodenum
20	chr11:108117400-108131600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr11:108117400-108132200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr11:108117600-108131400	Strong transcription	Rectal Mucosa Donor 29	rectum
23	chr11:108117800-108131600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr11:108118200-108132200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr11:108118400-108131800	Strong transcription	Fetal Thymus	thymus
26	chr11:108118600-108132200	Strong transcription	Primary neutrophils fromperipheralblood	blood
27	chr11:108118600-108140200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr11:108118800-108131400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr11:108118800-108133000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
30	chr11:108119600-108132200	Strong transcription	Duodenum Smooth Muscle	Duodenum
31	chr11:108121000-108131600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr11:108121200-108131600	Strong transcription	Skeletal Muscle Female	skeletal muscle
33	chr11:108121200-108132800	Strong transcription	H1 Cell Line	embryonic stem cell
34	chr11:108121600-108131400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr11:108121600-108131400	Strong transcription	Brain Germinal Matrix	brain
36	chr11:108122000-108142200	Weak transcription	Right Ventricle	heart
37	chr11:108122000-108147400	Weak transcription	Spleen	Spleen
38	chr11:108122400-108131400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
39	chr11:108122800-108131600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr11:108124000-108132200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr11:108124400-108131400	Strong transcription	Osteobl	bone
42	chr11:108124400-108131800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
43	chr11:108124600-108131400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
44	chr11:108124600-108131600	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr11:108124600-108131600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr11:108124600-108131600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
47	chr11:108124600-108131800	Strong transcription	Sigmoid Colon	Sigmoid Colon
48	chr11:108124600-108132200	Strong transcription	Fetal Muscle Leg	muscle
49	chr11:108124600-108132800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr11:108124800-108131600	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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