The 2.0 version of rSNPBase

Variant report

Variant rs6426071
Chromosome Location chr1:225585610-225585611
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225568200-225595800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:225570400-225587600 Weak transcription Spleen Spleen
3 chr1:225570800-225600000 Weak transcription HSMMtube muscle
4 chr1:225575600-225588200 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr1:225576200-225594400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:225576400-225586000 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr1:225576400-225586000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:225576600-225588600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:225578000-225588600 Weak transcription Fetal Kidney kidney
10 chr1:225578000-225597800 Weak transcription Brain Cingulate Gyrus brain
11 chr1:225578000-225599200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:225578400-225588200 Weak transcription Right Ventricle heart
13 chr1:225578600-225588200 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr1:225580800-225599200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr1:225581400-225592600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:225581600-225596200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr1:225581800-225585800 Weak transcription Primary T cells fromperipheralblood blood
18 chr1:225581800-225590800 Weak transcription H9 Cell Line embryonic stem cell
19 chr1:225582000-225585800 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr1:225582000-225586000 Weak transcription Ovary ovary
21 chr1:225582000-225587800 Weak transcription GM12878-XiMat blood
22 chr1:225582000-225597800 Weak transcription Brain Anterior Caudate brain
23 chr1:225582200-225588000 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr1:225582200-225588200 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr1:225582200-225588200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:225582200-225588600 Weak transcription Muscle Satellite Cultured Cells --
27 chr1:225582200-225591600 Weak transcription Brain Angular Gyrus brain
28 chr1:225582200-225591800 Weak transcription Brain Hippocampus Middle brain
29 chr1:225582200-225610400 Strong transcription Fetal Thymus thymus
30 chr1:225582400-225585800 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr1:225582400-225588600 Weak transcription HepG2 liver
32 chr1:225582600-225588200 Weak transcription NH-A brain
33 chr1:225582600-225592400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:225582600-225597800 Weak transcription Fetal Brain Male brain
35 chr1:225582800-225586000 Weak transcription Primary B cells from peripheral blood blood
36 chr1:225583000-225587400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr1:225583200-225588200 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr1:225583200-225594000 Strong transcription Duodenum Smooth Muscle Duodenum
39 chr1:225583200-225597800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:225583400-225585800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr1:225583400-225586400 Strong transcription Colon Smooth Muscle Colon
42 chr1:225583400-225588200 Weak transcription Colonic Mucosa Colon
43 chr1:225583400-225588800 Weak transcription H1 Cell Line embryonic stem cell
44 chr1:225583400-225589800 Strong transcription Thymus Thymus
45 chr1:225583400-225591400 Strong transcription Stomach Smooth Muscle stomach
46 chr1:225583400-225595400 Strong transcription Fetal Brain Female brain
47 chr1:225583400-225598000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr1:225583400-225601600 Strong transcription Primary monocytes fromperipheralblood blood
49 chr1:225583400-225601600 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr1:225583400-225601800 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015