Variant report

Variant	rs6428007
Chromosome Location	chr1:203352518-203352519
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10800920	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10920623	0.83[ASN][1000 genomes]
rs10920624	0.83[ASN][1000 genomes]
rs10920626	0.81[ASN][1000 genomes]
rs11577027	0.88[ASN][1000 genomes]
rs11577596	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12030392	0.84[ASN][1000 genomes]
rs12044497	0.84[ASN][1000 genomes]
rs12142664	0.81[ASN][1000 genomes]
rs2050933	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2050934	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4391719	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4558044	0.85[ASN][1000 genomes]
rs6428009	0.81[ASN][1000 genomes]
rs6669887	0.91[ASN][1000 genomes]
rs6679625	0.91[ASN][1000 genomes]
rs7540920	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7543408	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:203351600-203353400	Weak transcription	Fetal Heart	heart
2	chr1:203351800-203353400	Strong transcription	Adipose Nuclei	Adipose
3	chr1:203351800-203354800	Weak transcription	Spleen	Spleen
4	chr1:203351800-203364800	Weak transcription	Ovary	ovary

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links