Variant report

Variant	rs6669887
Chromosome Location	chr1:203346528-203346529
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:203338779..203342601-chr1:203346391..203348624,3	K562	blood:
2	chr1:203338779..203341773-chr1:203346391..203348624,2	K562	blood:

rs_ID	r²[population]
rs10920623	0.85[ASN][1000 genomes]
rs10920624	0.83[ASN][1000 genomes]
rs10920626	0.81[ASN][1000 genomes]
rs11577027	0.97[ASN][1000 genomes]
rs11578869	0.87[ASN][1000 genomes]
rs12030392	0.84[ASN][1000 genomes]
rs12044497	0.84[ASN][1000 genomes]
rs12142664	0.81[ASN][1000 genomes]
rs1935170	0.87[ASN][1000 genomes]
rs2050933	0.90[ASN][1000 genomes]
rs2050934	0.90[ASN][1000 genomes]
rs36092819	0.87[ASN][1000 genomes]
rs6428007	0.91[ASN][1000 genomes]
rs6428009	0.81[ASN][1000 genomes]
rs6679625	1.00[ASN][1000 genomes]
rs6697045	0.87[ASN][1000 genomes]
rs7540920	0.89[ASN][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:203334000-203347600	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr1:203336800-203349200	Weak transcription	Pancreas	Pancrea
3	chr1:203338800-203347600	Weak transcription	Left Ventricle	heart
4	chr1:203338800-203347600	Weak transcription	Right Ventricle	heart
5	chr1:203339800-203348000	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr1:203343400-203347600	Weak transcription	Fetal Kidney	kidney
7	chr1:203343600-203347600	Weak transcription	Aorta	Aorta
8	chr1:203343600-203348200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr1:203343800-203347800	Weak transcription	Fetal Lung	lung
10	chr1:203343800-203348600	Weak transcription	Fetal Intestine Large	intestine
11	chr1:203343800-203349000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr1:203344200-203347600	Weak transcription	Colon Smooth Muscle	Colon
13	chr1:203344200-203347600	Weak transcription	Fetal Stomach	stomach
14	chr1:203344200-203347800	Weak transcription	Stomach Smooth Muscle	stomach
15	chr1:203344200-203348000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr1:203344400-203349200	Weak transcription	Monocytes-CD14+_RO01746	blood
17	chr1:203344800-203347600	Weak transcription	Rectal Smooth Muscle	rectum
18	chr1:203344800-203348400	Weak transcription	Duodenum Smooth Muscle	Duodenum
19	chr1:203345000-203347600	Weak transcription	Fetal Heart	heart
20	chr1:203345200-203347600	Weak transcription	Ovary	ovary
21	chr1:203345400-203347600	Weak transcription	Fetal Intestine Small	intestine
22	chr1:203346200-203347600	Weak transcription	Adipose Nuclei	Adipose
23	chr1:203346200-203347800	Weak transcription	NHLF	lung
24	chr1:203346400-203346800	Enhancers	Rectal Mucosa Donor 29	rectum

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