Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10800920	0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs10920623	0.88[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs10920626	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs10920630	0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10920631	0.86[ASN][1000 genomes]
rs10920632	0.86[ASN][1000 genomes]
rs11577027	0.80[ASN][1000 genomes]
rs11577596	0.80[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs11578869	0.94[ASN][1000 genomes]
rs12030392	0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs12044497	0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs12142664	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1935170	0.94[ASN][1000 genomes]
rs2050933	0.83[ASN][1000 genomes]
rs2050934	0.83[ASN][1000 genomes]
rs36092819	0.94[ASN][1000 genomes]
rs4391719	0.94[ASN][1000 genomes]
rs4558044	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6428007	0.83[ASN][1000 genomes]
rs6428009	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs6669887	0.83[ASN][1000 genomes]
rs6679625	0.83[ASN][1000 genomes]
rs6697045	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7540920	0.84[ASN][1000 genomes]
rs7543408	0.80[AMR][1000 genomes];0.95[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10920624	PIK3C2B	cis	cerebellum	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:203351800-203354800	Weak transcription	Spleen	Spleen
2	chr1:203351800-203364800	Weak transcription	Ovary	ovary
3	chr1:203353400-203353800	Enhancers	Fetal Heart	heart
4	chr1:203353400-203357800	Weak transcription	Adipose Nuclei	Adipose

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