Variant report

Variant	rs6433238
Chromosome Location	chr2:171589253-171589254
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:171582724..171584817-chr2:171587702..171590069,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10175644	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10194303	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10930438	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11895153	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12612710	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12613472	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12619010	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12994793	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13028382	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1362489	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1362490	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1894919	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34002163	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3749036	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3764915	0.80[EUR][1000 genomes]
rs3764916	0.80[EUR][1000 genomes]
rs4132720	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6433235	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6433246	0.87[EUR][1000 genomes]
rs6433247	0.83[EUR][1000 genomes]
rs6433248	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs66833017	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6711176	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6723611	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6726371	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6738022	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6757195	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7580460	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7608979	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs869954	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs953680	0.87[EUR][1000 genomes]
rs954321	0.87[EUR][1000 genomes]
rs9973711	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:171574000-171620800	Weak transcription	Pancreas	Pancrea
2	chr2:171580200-171589600	Weak transcription	Fetal Intestine Small	intestine
3	chr2:171580800-171590400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr2:171584800-171590600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr2:171586400-171592200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr2:171586800-171590000	Weak transcription	Fetal Intestine Large	intestine
7	chr2:171586800-171590800	Weak transcription	HMEC	breast

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