The 2.0 version of rSNPBase

Variant report

Variant rs6433675
Chromosome Location chr2:178395057-178395058
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178296400-178397000 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr2:178335000-178410600 Weak transcription Thymus Thymus
3 chr2:178338000-178403000 Weak transcription Brain Hippocampus Middle brain
4 chr2:178348400-178402600 Weak transcription NHDF-Ad bronchial
5 chr2:178349800-178407800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr2:178350000-178407000 Weak transcription Osteobl bone
7 chr2:178356000-178405400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr2:178358600-178406000 Weak transcription Ovary ovary
9 chr2:178358600-178417000 Weak transcription Aorta Aorta
10 chr2:178358800-178396600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr2:178360600-178405400 Weak transcription NH-A brain
12 chr2:178362400-178395600 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr2:178363000-178395600 Strong transcription Primary monocytes fromperipheralblood blood
14 chr2:178364400-178416600 Weak transcription Esophagus oesophagus
15 chr2:178367800-178397200 Weak transcription Psoas Muscle Psoas
16 chr2:178371400-178399800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr2:178372600-178405400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr2:178372800-178399200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:178372800-178416600 Weak transcription A549 lung
20 chr2:178375200-178400800 Weak transcription Lung lung
21 chr2:178375600-178413800 Weak transcription K562 blood
22 chr2:178376000-178397400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr2:178376200-178407800 Weak transcription Left Ventricle heart
24 chr2:178376200-178416600 Weak transcription Pancreas Pancrea
25 chr2:178376600-178407600 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr2:178378400-178410000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr2:178379600-178407600 Weak transcription Fetal Kidney kidney
28 chr2:178379800-178406000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr2:178384800-178395200 Weak transcription Rectal Smooth Muscle rectum
30 chr2:178385400-178401000 Weak transcription Fetal Intestine Small intestine
31 chr2:178385400-178405000 Weak transcription GM12878-XiMat blood
32 chr2:178385800-178395200 Weak transcription Right Ventricle heart
33 chr2:178386000-178407400 Weak transcription HSMMtube muscle
34 chr2:178386800-178405400 Weak transcription Primary B cells from peripheral blood blood
35 chr2:178387600-178402400 Weak transcription Placenta Placenta
36 chr2:178388600-178416600 Weak transcription Muscle Satellite Cultured Cells --
37 chr2:178388800-178405400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr2:178389000-178405200 Weak transcription Fetal Intestine Large intestine
39 chr2:178389000-178407800 Weak transcription Fetal Muscle Trunk muscle
40 chr2:178389000-178408200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr2:178389000-178416800 Weak transcription Small Intestine intestine
42 chr2:178389200-178406000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr2:178389200-178416600 Weak transcription Duodenum Mucosa Duodenum
44 chr2:178389600-178397200 Weak transcription Primary T cells from cord blood blood
45 chr2:178389600-178403200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr2:178389800-178395400 Weak transcription Stomach Mucosa stomach
47 chr2:178389800-178402800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr2:178389800-178406800 Weak transcription Primary T cells fromperipheralblood blood
49 chr2:178389800-178407600 Weak transcription Adipose Nuclei Adipose
50 chr2:178389800-178410200 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015